Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0328
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       23   6.1  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       23   6.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   8.1  

>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 222 VVFKNYIEKETKIHRKFYNRYL-NVPNNLMYRRPVL 118
           ++F +YIEK   I+ ++Y + L  + + +  +RP L
Sbjct: 83  IIFIDYIEKGKTINSEYYIKLLERLKDEIATKRPHL 118


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 222 VVFKNYIEKETKIHRKFYNRYL-NVPNNLMYRRPVL 118
           ++F +YIEK   I+ ++Y + L  + + +  +RP L
Sbjct: 83  IIFIDYIEKGKTINSEYYIKLLERLKDEIATKRPHL 118


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 507  PVTIDYGHCAFFFSNLQSIKGMNFF*HLL 421
            P+ + YG   F +  + ++KG+ FF  LL
Sbjct: 934  PMPVLYG--VFLYMGVSALKGLQFFDRLL 960


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,124
Number of Sequences: 2352
Number of extensions: 10798
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)