Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0324
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 59 4e-09
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 54 1e-07
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 52 3e-07
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_30216| Best HMM Match : TIL (HMM E-Value=3.1) 42 5e-04
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_41433| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.6e-07) 30 2.0
SB_18498| Best HMM Match : PX (HMM E-Value=1.6e-15) 29 3.5
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.5
SB_53943| Best HMM Match : PsbQ (HMM E-Value=1.5) 29 4.6
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 58.8 bits (136), Expect = 4e-09
Identities = 33/61 (54%), Positives = 39/61 (63%)
Frame = -1
Query: 624 ERPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPTWHRIRSPASSFE*AGVLTHLKFEN 445
E+PTPF+ S ER L FGSS ASS YQN PT RI P + + G+LT+LKFEN
Sbjct: 58 EQPTPFVGSDERRLWHPYRAFGSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLLTNLKFEN 116
Query: 444 R 442
R
Sbjct: 117 R 117
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/42 (61%), Positives = 28/42 (66%)
Frame = +2
Query: 554 DEPNVVFKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQR 679
DEPN + +RS D KGVG S QQDGGHGS NPLR QR
Sbjct: 3 DEPNARLRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLRKGQR 44
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/45 (57%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = -1
Query: 645 WPPSCCH--ERPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
W P + E+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 71 WLPQASYPCEQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 115
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = -1
Query: 627 HERPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+E+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 122 YEQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 158
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/44 (61%), Positives = 29/44 (65%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPTWHRIRSPAS 490
+PTPF+ S ER L LN FGSS ASSAYQN P RI PAS
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = -1
Query: 624 ERPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
E+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 41 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 76
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = -1
Query: 624 ERPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
E+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 38 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 73
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = -1
Query: 624 ERPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
E+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 39 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 74
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = -1
Query: 624 ERPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
E+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 39 EQPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 74
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +2
Query: 554 DEPNVVFKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLR 667
DEPN + +RS D KGVG S QQDGGHGS NPL+
Sbjct: 3 DEPNARLRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLK 40
>SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT--WHRIRSPASS 487
+PTPF+ S ER L LN FGSS ASSAYQ WPT H + P S
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPTRNSHSLGDPLES 48
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKWPT 36
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNHAFGSSRIASSAYQKWPT 36
>SB_11440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -1
Query: 624 ERPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
E+PTPF+ S ER L LN FGSS ASSA Q WPT
Sbjct: 58 EQPTPFVGSDERRLWHLNRAFGSSRIASSALQKWPT 93
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN +GSS ASSAYQ WPT
Sbjct: 2 QPTPFVGSDERRLWHLNRAYGSSRIASSAYQKWPT 36
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = +2
Query: 554 DEPNVVFKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLR 667
DEPN + +RS D KGVG S QQDGGHGS NP +
Sbjct: 3 DEPNARLRCQSRRSSDPTKGVGCSRQQDGGHGSWNPAK 40
>SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = -1
Query: 621 RPTPFMVSHERFLGALNTTFGSSHSASSAYQNWPT 517
+PTPF+ S ER L LN FGSS ASSAYQ PT
Sbjct: 2 QPTPFVGSDERRLWHLNRAFGSSRIASSAYQKGPT 36
>SB_30216| Best HMM Match : TIL (HMM E-Value=3.1)
Length = 212
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1
Query: 628 TAGRWPWKSESAKECATT 681
TAGRWPWK ESAKEC TT
Sbjct: 1 TAGRWPWKLESAKECVTT 18
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1
Query: 628 TAGRWPWKSESAKECATT 681
TAGRWPWK ESAKEC TT
Sbjct: 1 TAGRWPWKLESAKECVTT 18
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1
Query: 628 TAGRWPWKSESAKECATT 681
TAGRWPWK ESAKEC TT
Sbjct: 80 TAGRWPWKLESAKECVTT 97
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3
Query: 588 NAHGTP*KALVAHDSRTVAMEVGIR 662
+AH TP K LVA DSRTVAMEVGIR
Sbjct: 9 DAHQTPQKVLVALDSRTVAMEVGIR 33
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2
Query: 254 PPSGFPLTST*PGIVHHLSGPSICA 180
PP FPL S GIVHHLSGP+ CA
Sbjct: 5 PPPEFPLASPYSGIVHHLSGPNRCA 29
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -1
Query: 255 ASIRVSPDFDLTRHSSPSFGSQHLCS 178
AS RVS F L RHSSPSFGSQ + S
Sbjct: 39 ASTRVSSGFTLFRHSSPSFGSQQMRS 64
>SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -1
Query: 315 ISLSPLYPVPTIDLHVRIATAS 250
ISLSPLYP TIDLHVR + S
Sbjct: 38 ISLSPLYPNLTIDLHVRSNSCS 59
>SB_41433| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.6e-07)
Length = 175
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = -2
Query: 671 HSLADSDFHGHRPAVMSDQRLSWCPMSVF*AP*TLRLVHPTAPVLLTKIGPLG 513
H L ++ + GHR VM Q++ W P S F T ++ H T P +T I P+G
Sbjct: 121 HGLNETIYLGHR--VM--QKI-WTPDSYFLNAKTAKMHHVTTPNQMTLIAPMG 168
>SB_18498| Best HMM Match : PX (HMM E-Value=1.6e-15)
Length = 402
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 642 PPSCCHERPTPFMVSHERFLGALNTTFGSSHSASS 538
PP+ C ERP+ ++ GAL TT S+ SS
Sbjct: 11 PPTVCSERPSSSVIGANDSAGALPTTTNSTCFVSS 45
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 680 VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVF 585
+ H + ++DF G R A+M+D +L C S+F
Sbjct: 386 LTTHFMDEADFLGDRIAIMADGQLRCCGSSLF 417
>SB_53943| Best HMM Match : PsbQ (HMM E-Value=1.5)
Length = 540
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 642 PPSCCHERPTPFMVSHERFLGALNTT 565
PP C ERP+ F++ GAL TT
Sbjct: 332 PPILCSERPSSFVIGANGSAGALPTT 357
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,627,605
Number of Sequences: 59808
Number of extensions: 456078
Number of successful extensions: 1125
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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