Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0324
(681 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p pro... 46 6e-05
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 29 7.8
BT011165-1|AAR82833.1| 1796|Drosophila melanogaster AT07527p pro... 29 7.8
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 29 7.8
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 29 7.8
AY051769-1|AAK93193.1| 763|Drosophila melanogaster LD29569p pro... 29 7.8
AE014297-2064|AAF55213.2| 636|Drosophila melanogaster CG33207-P... 29 7.8
AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD... 29 7.8
AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB... 29 7.8
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 29 7.8
AB081475-1|BAC06341.1| 636|Drosophila melanogaster transmembran... 29 7.8
>BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p
protein.
Length = 46
Score = 45.6 bits (103), Expect = 6e-05
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2
Query: 179 EHKCWDPKDGELCLVRSKSGETLME 253
EH C DPKDGEL L+R KSGETLME
Sbjct: 9 EHICCDPKDGELYLIRLKSGETLME 33
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 28.7 bits (61), Expect = 7.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 212 VHHLSGPSICAQSAPSFTDWKRD 144
+HHL GP +C + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595
>BT011165-1|AAR82833.1| 1796|Drosophila melanogaster AT07527p protein.
Length = 1796
Score = 28.7 bits (61), Expect = 7.8
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 638 RPAVMSDQRLSWCPMSVF*AP*TLR-LVHPTAPVLLTKIGPLGTASDLRLHRSS-KPEFS 465
+P D RL+ P + +P T + L H AP+LL+ G S RL RSS +P S
Sbjct: 1170 KPTKPLDIRLTHAPHAPLISPITGQPLSHVPAPLLLSSSTNSGAGSSFRLARSSTQPLQS 1229
Query: 464 P 462
P
Sbjct: 1230 P 1230
>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p
protein.
Length = 1645
Score = 28.7 bits (61), Expect = 7.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 212 VHHLSGPSICAQSAPSFTDWKRD 144
+HHL GP +C + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595
>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
protein.
Length = 1101
Score = 28.7 bits (61), Expect = 7.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 212 VHHLSGPSICAQSAPSFTDWKRD 144
+HHL GP +C + T W+R+
Sbjct: 41 IHHLYGPFLCVVPLSTMTAWQRE 63
>AY051769-1|AAK93193.1| 763|Drosophila melanogaster LD29569p
protein.
Length = 763
Score = 28.7 bits (61), Expect = 7.8
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 638 RPAVMSDQRLSWCPMSVF*AP*TLR-LVHPTAPVLLTKIGPLGTASDLRLHRSS-KPEFS 465
+P D RL+ P + +P T + L H AP+LL+ G S RL RSS +P S
Sbjct: 137 KPTKPLDIRLTHAPHAPLISPITGQPLSHVPAPLLLSSSTNSGAGSSFRLARSSTQPLQS 196
Query: 464 P 462
P
Sbjct: 197 P 197
>AE014297-2064|AAF55213.2| 636|Drosophila melanogaster CG33207-PB,
isoform B protein.
Length = 636
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 299 YTQFRRSICTSESLRPPSGFPLTST*PGIVHHLSGP 192
Y Q + +S+ PSG+P+T + P +V GP
Sbjct: 184 YQQHHSELLQGKSIHYPSGYPMTRSPPFLVSSSPGP 219
>AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD,
isoform D protein.
Length = 1851
Score = 28.7 bits (61), Expect = 7.8
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 638 RPAVMSDQRLSWCPMSVF*AP*TLR-LVHPTAPVLLTKIGPLGTASDLRLHRSS-KPEFS 465
+P D RL+ P + +P T + L H AP+LL+ G S RL RSS +P S
Sbjct: 1225 KPTKPLDIRLTHAPHAPLISPITGQPLSHVPAPLLLSSSTNSGAGSSFRLARSSTQPLQS 1284
Query: 464 P 462
P
Sbjct: 1285 P 1285
>AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB,
isoform B protein.
Length = 2197
Score = 28.7 bits (61), Expect = 7.8
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 638 RPAVMSDQRLSWCPMSVF*AP*TLR-LVHPTAPVLLTKIGPLGTASDLRLHRSS-KPEFS 465
+P D RL+ P + +P T + L H AP+LL+ G S RL RSS +P S
Sbjct: 1571 KPTKPLDIRLTHAPHAPLISPITGQPLSHVPAPLLLSSSTNSGAGSSFRLARSSTQPLQS 1630
Query: 464 P 462
P
Sbjct: 1631 P 1631
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 28.7 bits (61), Expect = 7.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 212 VHHLSGPSICAQSAPSFTDWKRD 144
+HHL GP +C + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595
>AB081475-1|BAC06341.1| 636|Drosophila melanogaster transmembrane
protein Pxb protein.
Length = 636
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 299 YTQFRRSICTSESLRPPSGFPLTST*PGIVHHLSGP 192
Y Q + +S+ PSG+P+T + P +V GP
Sbjct: 184 YQQHHSELLQGKSIHYPSGYPMTRSPPFLVSSSPGP 219
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,370,421
Number of Sequences: 53049
Number of extensions: 678248
Number of successful extensions: 1820
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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