Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0323
         (473 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023953-1|ABB36457.1|  509|Drosophila melanogaster GH08757p pro...    31   0.80 
AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-P...    29   2.4  
U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensit...    29   3.2  
AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p pro...    29   3.2  
AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA...    29   3.2  
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ...    27   9.8  
AE014296-1023|AAF50736.2|  461|Drosophila melanogaster CG13287-P...    27   9.8  

>BT023953-1|ABB36457.1|  509|Drosophila melanogaster GH08757p
           protein.
          Length = 509

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 18/71 (25%), Positives = 32/71 (45%)
 Frame = -2

Query: 370 FCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLNRITREF*TATSVSATSPLCT 191
           F P+ P   +  A        Y+ +  P  + +PP S  +++      ATS ++T+   T
Sbjct: 429 FLPYVPTTTASTATATNAIATYAASATPSPTPTPPPSAGHQLPMGHANATSTTSTANTTT 488

Query: 190 LGTKHRAPADI 158
             T + +PA I
Sbjct: 489 TTTTYVSPAGI 499


>AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-PA
           protein.
          Length = 1373

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 175 GVSFQACRVVTWRKRSSPFKTPA*SGSGHCQAGSLTG-AVHLSKNNAGVLRPA 330
           G   QA     W   SSP   PA  GS  C +G+  G + H +  NAG LRPA
Sbjct: 775 GQGHQAPPATMWPHSSSPCY-PASYGSS-CGSGTGAGTSPHNNDGNAGALRPA 825


>U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 622

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 178 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 74
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 178 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 74
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 178 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 74
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
           protein.
          Length = 1571

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -2

Query: 172 APADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLCYTSHVSLQCQTRVKLNR 8
           AP D++ R+P P + + +     +      +ETI     T  VS   Q+R+ L R
Sbjct: 611 APIDVLIRSPHPASVLLSGAKTNICGSLLGQETIFRWVLTGPVSASAQSRIPLFR 665


>AE014296-1023|AAF50736.2|  461|Drosophila melanogaster CG13287-PA
           protein.
          Length = 461

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = -2

Query: 301 LTDVP--PQSNSPPGSVLNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR 128
           L D P  P ++SPP  + +  T+   ++ S S++SP  T  ++  +P D     PL P++
Sbjct: 159 LVDSPEAPSTSSPPPPMRSAFTKVASSSLSTSSSSPSTT--SRLESPVD-AGAPPLSPDQ 215

Query: 127 VS 122
           +S
Sbjct: 216 LS 217


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,750,323
Number of Sequences: 53049
Number of extensions: 503818
Number of successful extensions: 1262
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)