Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0321
         (356 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   1.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   1.6  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    22   1.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   1.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   5.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   5.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   5.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   5.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   8.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   8.7  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 252 QKCRNDVSTTSVNTPS-LVLNFTIKCHHVSNLARAVSSTFALLSLS 118
           + CR      +  TP+  ++N+T+  HH +  A + +S+ +  S S
Sbjct: 49  KSCRYTAGLAANVTPADSMVNYTLGQHHHNGAAVSAASSVSAASAS 94


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 252 QKCRNDVSTTSVNTPS-LVLNFTIKCHHVSNLARAVSSTFALLSLS 118
           + CR      +  TP+  ++N+T+  HH +  A + +S+ +  S S
Sbjct: 108 KSCRYTAGLAANVTPADSMVNYTLGQHHHNGAAVSAASSVSAASAS 153


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 252 QKCRNDVSTTSVNTPS-LVLNFTIKCHHVSNLARAVSSTFALLSLS 118
           + CR      +  TP+  ++N+T+  HH +  A + +S+ +  S S
Sbjct: 49  KSCRYTAGLAANVTPADSMVNYTLGQHHHNGAAVSAASSVSAASAS 94


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 252 QKCRNDVSTTSVNTPS-LVLNFTIKCHHVSNLARAVSSTFALLSLS 118
           + CR      +  TP+  ++N+T+  HH +  A + +S+ +  S S
Sbjct: 108 KSCRYTAGLAANVTPADSMVNYTLGQHHHNGAAVSAASSVSAASAS 153


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 38  WSVLIDTFAKETNDNCVNKRLKLLVIPLRLNNAKVEETALAK 163
           W+  ID F   T+   V +  +L      L NA+V+ TAL K
Sbjct: 102 WT-FIDVFIMLTSTAFVFRLKQLNAKVEMLKNARVKNTALWK 142


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +3

Query: 291 SWSNIRQAINEMC 329
           +W N+R+  N +C
Sbjct: 265 AWKNLREDYNRLC 277


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +3

Query: 291 SWSNIRQAINEMC 329
           +W N+R+  N +C
Sbjct: 265 AWKNLREDYNRLC 277


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +3

Query: 291 SWSNIRQAINEMC 329
           +W N+R+  N +C
Sbjct: 265 AWKNLREDYNRLC 277


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 144 STFALLSLSGITS 106
           +TF LL ++G+TS
Sbjct: 205 TTFGLLPVNGVTS 217


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 225 TSVNTPSLVLNFTIKC 178
           ++V TP+ V++ TI C
Sbjct: 308 STVQTPTTVMSPTINC 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,750
Number of Sequences: 336
Number of extensions: 1506
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)