Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0321
         (356 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024501-11|AAB70366.2|  443|Caenorhabditis elegans Hypothetical...    29   1.3  
AF100662-2|AAC68976.1|  478|Caenorhabditis elegans Hypothetical ...    28   1.7  
Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical pr...    28   2.2  
U29382-1|AAG00006.1|  382|Caenorhabditis elegans Hypothetical pr...    28   2.2  
AC006772-1|AAF60610.3|  326|Caenorhabditis elegans Hypothetical ...    27   2.9  
AC024881-4|AAK71412.2|  314|Caenorhabditis elegans Serpentine re...    27   3.9  
Z81069-5|CAB02995.1|  504|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z70271-7|CAJ80829.1|  559|Caenorhabditis elegans Hypothetical pr...    26   6.7  
Z70271-6|CAA94232.1|  562|Caenorhabditis elegans Hypothetical pr...    26   6.7  
U41009-5|AAO44915.1|  173|Caenorhabditis elegans Hypothetical pr...    26   8.9  
AL021471-2|CAA16296.2|  240|Caenorhabditis elegans Hypothetical ...    26   8.9  
AF016670-8|AAB66101.1|  783|Caenorhabditis elegans Hypothetical ...    26   8.9  
AF016435-5|AAB65881.1|  538|Caenorhabditis elegans Hypothetical ...    26   8.9  

>AF024501-11|AAB70366.2|  443|Caenorhabditis elegans Hypothetical
           protein F39E9.1 protein.
          Length = 443

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
 Frame = -3

Query: 231 STTSVNTPSLVLN-FTIKCHHVS---NLARAVSSTFALLSLSGITSNFSLLFTQLSFVSL 64
           STTSVNT  LV+N F  + H V    +L R V +   L+S   I S  +++F Q   +S 
Sbjct: 291 STTSVNTTGLVVNDFLFQEHVVKFQLDLTR-VRTIGTLVSAIPIASQINVIFNQGGGISA 349

Query: 63  ANVSIRT 43
            + +  T
Sbjct: 350 QSYATNT 356


>AF100662-2|AAC68976.1|  478|Caenorhabditis elegans Hypothetical
           protein H34C03.1 protein.
          Length = 478

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 44  VLIDTFAKETNDNCVNKRLKLLVIPLRLNNAKVEETALAKF 166
           VL+D      ++  +   LK+++ P R + AK E TALAKF
Sbjct: 371 VLLDGSEGRCHEASLFGELKMVLEPRRTDFAKRERTALAKF 411


>Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical
           protein B0035.5 protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 29  FQCWSVLIDTFAKETNDNCVNKRLKLLVIPLRLN--NAKVEETALAKFETWWHLIVK 193
           FQ     ID F KE+N+  VN+   L + P   N  + ++++  +   ++W  +I++
Sbjct: 120 FQRLQSSIDDFQKESNNQAVNRLYYLALPPSVFNVVSTELKKNCMDHGDSWTRVIIE 176


>U29382-1|AAG00006.1|  382|Caenorhabditis elegans Hypothetical
           protein R03H10.2 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 176 WHLIVKFSTRLGVFTDVVLTSFLHFCLE 259
           W L     + LGVF  + L SFL+FC +
Sbjct: 115 WFLRGYLLSELGVFFFIFLASFLYFCFD 142


>AC006772-1|AAF60610.3|  326|Caenorhabditis elegans Hypothetical
           protein Y46D2A.2 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
 Frame = -3

Query: 231 STTSVNTPSLVLN-FTIKCHHVS---NLARAVSSTFALLSLSGITSNFSLLFTQLSFVSL 64
           +TTSVNT  LV+N F  + H V    +L R V +   L+S   I S  +++F Q   +S 
Sbjct: 187 TTTSVNTTGLVVNDFLFQEHVVKFQLDLTR-VRTIGTLVSAIPIASQINVIFNQGGGISA 245

Query: 63  ANVSIRT 43
            + +  T
Sbjct: 246 QSYATNT 252


>AC024881-4|AAK71412.2|  314|Caenorhabditis elegans Serpentine
           receptor, class sx protein5 protein.
          Length = 314

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 213 YLLM*Y*HHFYIFVWKIQCIRKTLIYSWSNI 305
           ++L+ Y   FYI +W+    R   + SWS I
Sbjct: 251 FVLISYSQFFYIVIWRSPDYRNAFLESWSCI 281


>Z81069-5|CAB02995.1|  504|Caenorhabditis elegans Hypothetical
           protein F25H9.5 protein.
          Length = 504

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +2

Query: 23  RAFQC---WSVLIDTFAKETNDNCVNKRLKLLVI 115
           R ++C   WS L++ FAKET+    N+   +L++
Sbjct: 143 RPYECRQGWSTLLERFAKETDIQLFNQDEPILML 176


>Z70271-7|CAJ80829.1|  559|Caenorhabditis elegans Hypothetical
           protein W08D2.3b protein.
          Length = 559

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 150 VSSTFALLSLSGITSNFSLLFTQLSFVSL 64
           V  T   +SLS + SNF ++F Q SF+ L
Sbjct: 129 VFGTVLGISLSAVISNFVVIFKQQSFLLL 157


>Z70271-6|CAA94232.1|  562|Caenorhabditis elegans Hypothetical
           protein W08D2.3a protein.
          Length = 562

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 150 VSSTFALLSLSGITSNFSLLFTQLSFVSL 64
           V  T   +SLS + SNF ++F Q SF+ L
Sbjct: 132 VFGTVLGISLSAVISNFVVIFKQQSFLLL 160


>U41009-5|AAO44915.1|  173|Caenorhabditis elegans Hypothetical
           protein C06E7.1d protein.
          Length = 173

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 230 LTSFLHFCLENTMHQENPHL-FLVKYQTSYQ*NVLMHLLRLV 352
           + SFLH+ L  T+ QE+  L  L+KY   +Q ++  H + L+
Sbjct: 90  IISFLHYWL-ITLCQESHFLGLLIKYSIQFQDSITRHAMFLL 130


>AL021471-2|CAA16296.2|  240|Caenorhabditis elegans Hypothetical
           protein Y17D7C.2 protein.
          Length = 240

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 20/89 (22%), Positives = 38/89 (42%)
 Frame = +2

Query: 32  QCWSVLIDTFAKETNDNCVNKRLKLLVIPLRLNNAKVEETALAKFETWWHLIVKFSTRLG 211
           + W+VL D         CV K L  L        +K +ET L     +W++  +    + 
Sbjct: 112 EAWAVLRDCIESPKQQKCVTKFLDKL-----YEISKSDETKLTCHRYYWYMSHRTQIEVV 166

Query: 212 VFTDVVLTSFLHFCLENTMHQENPHLFLV 298
           +  D ++  + +  L++  H +N   FL+
Sbjct: 167 LEDDNIVYVYKNSSLKSVDH-KNHSFFLM 194


>AF016670-8|AAB66101.1|  783|Caenorhabditis elegans Hypothetical
           protein K02F6.1 protein.
          Length = 783

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 226 STDIISTFLFGKYNASGKPSFIPGQISDKLSMK 324
           +TD +ST   G+  ASG+ +  PG IS  LS K
Sbjct: 743 NTDHVSTRRRGRDTASGRDAPSPGIISGFLSYK 775


>AF016435-5|AAB65881.1|  538|Caenorhabditis elegans Hypothetical
           protein F59D6.6 protein.
          Length = 538

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 264 VFSKQKCRNDVSTTSVNTPSLVLNFTIKCHHVSNLARAVSST 139
           VF  + C N+      +  S  + F  KC+HV  +    +ST
Sbjct: 35  VFDNESCENNCKFNYTHVNSKSIKFFPKCYHVCAIIFIDNST 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,515,034
Number of Sequences: 27780
Number of extensions: 136479
Number of successful extensions: 399
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)