Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0321
         (356 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   0.35 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   3.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.3  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 0.35
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 177 HHVSNLARAVSSTFALLSLSGITSNF 100
           HH++ L R +S+ F      GIT  F
Sbjct: 320 HHLNRLGREISTYFTFTRPCGITLTF 345


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 355 VHQSQQMHQH 326
           V QSQQ HQH
Sbjct: 789 VQQSQQRHQH 798


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 168 SNLARAVSSTFALLSLSGITSN 103
           S   R  SST A L LSG  SN
Sbjct: 839 STSPRPASSTAATLVLSGCPSN 860


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,566
Number of Sequences: 438
Number of extensions: 1653
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)