Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0320
         (307 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    27   0.16 
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    23   3.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   4.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   6.0  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       22   6.0  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   6.0  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = +3

Query: 75  RTLDVRSGRMKL-SSYVRD----FRTPEASRFQSVNEGAL*AQMLGPERW*TM-PGQVEV 236
           RT  V +G  ++  SY +D    + T E    +SV  G     +LGP  W TM  G +++
Sbjct: 588 RTKRVPAGLQRIIHSYFQDRELVYETSEGPVVRSVTAGVPQGSILGPTLWNTMYDGVLDI 647

Query: 237 RGNPDGD 257
              PD +
Sbjct: 648 ALPPDAE 654


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 304 PYTQFRRSICTSESLRSPSGFP 239
           P+T F RSIC  E     S  P
Sbjct: 260 PFTDFLRSICLPEQNFESSATP 281


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +1

Query: 178 SEHKCWDPKGGELCLVRSKSGETLMETVAILTCKSIVGTG 297
           S+ +C+ PK  E C +    G T       L CK+    G
Sbjct: 189 SQGRCFGPKPRECCHLFCAGGCTGPTQSDCLACKNFYDDG 228


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 129 FRTPEASRFQSVNEGAL*AQMLGPERW*TM 218
           F T +    +S+  G     +LGP  W TM
Sbjct: 678 FETSDGPVTRSITAGVPQGSILGPTLWNTM 707


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 274 TSESLRSPSGFP-LTST*PGIVHHLSG 197
           TSE +++P+ FP   S  P + H L G
Sbjct: 633 TSEMVKAPADFPKCDSYTPAVGHLLQG 659


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 112 DNFILPERTSSVRLHF 65
           D F+ PER S++ L F
Sbjct: 164 DTFVTPERKSAIDLTF 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,406
Number of Sequences: 2352
Number of extensions: 4792
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)