Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0314
(434 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 23 1.7
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 5.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 5.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 5.1
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 6.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.7
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 6.7
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 20 8.9
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.6 bits (46), Expect = 1.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 269 ESCFTFACPKFLSACPPPIEPGANYGRDAVKHQTQVFMDEV 391
E C T+AC + C I P AN A +VFMD +
Sbjct: 504 EECNTYACEFDGNDCSLGINPWANC--TASTRCWEVFMDGI 542
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 157 FVWSCIRSALMNPSSRCFEKRTTMR 231
F+W + S + +SR F+K T +
Sbjct: 496 FIWLVLSSTVRAYASRAFKKIVTYK 520
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 219 SFLEAPAGWIHQRTADARPNKWPVNGTFAR 130
+++EAP + Q + + N W +G R
Sbjct: 1153 NYMEAPQDNVSQPSDEVMENSWFYDGPLIR 1182
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 219 SFLEAPAGWIHQRTADARPNKWPVNGTFAR 130
+++EAP + Q + + N W +G R
Sbjct: 1153 NYMEAPQDNVSQPSDEVMENSWFYDGPLIR 1182
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc
finger protein protein.
Length = 456
Score = 20.6 bits (41), Expect = 6.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 43 PSLLRCYTCNALNNCSPP 96
P + CN L+N SPP
Sbjct: 36 PLAMLAAQCNKLSNKSPP 53
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 6.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -1
Query: 209 KHLLDGFINALRMQDQTNGQ*MVHLLGLFVDLIILVGTGGEQLFSALHV 63
K LL GF+ + D G + L GLF ++ G++ S +++
Sbjct: 1090 KSLL-GFLQSGGTSDDDEGSIEISLAGLFKCMLCTHQKAGDEKASLINI 1137
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 6.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -1
Query: 209 KHLLDGFINALRMQDQTNGQ*MVHLLGLFVDLIILVGTGGEQLFSALHV 63
K LL GF+ + D G + L GLF ++ G++ S +++
Sbjct: 1090 KSLL-GFLQSGGTSDDDEGSIEISLAGLFKCMLCTHQKAGDEKASLINI 1137
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 6.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -1
Query: 209 KHLLDGFINALRMQDQTNGQ*MVHLLGLFVDLIILVGTGGEQLFSALHV 63
K LL GF+ + D G + L GLF ++ G++ S +++
Sbjct: 1090 KSLL-GFLQSGGTSDDDEGSIEISLAGLFKCMLCTHQKAGDEKASLINI 1137
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 6.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -1
Query: 209 KHLLDGFINALRMQDQTNGQ*MVHLLGLFVDLIILVGTGGEQLFSALHV 63
K LL GF+ + D G + L GLF ++ G++ S +++
Sbjct: 1090 KSLL-GFLQSGGTSDDDEGSIEISLAGLFKCMLCTHQKAGDEKASLINI 1137
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory
receptor candidate 51 protein.
Length = 771
Score = 20.6 bits (41), Expect = 6.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 43 PSLLRCYTC 69
PSL +CY C
Sbjct: 41 PSLAKCYAC 49
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 20.2 bits (40), Expect = 8.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 225 GSSFLEAPAGWIHQRTADARPN 160
GSS E+P + +Q+T A N
Sbjct: 100 GSSTPESPEHYYNQKTLQANNN 121
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,800
Number of Sequences: 336
Number of extensions: 2775
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9670396
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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