BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0314
(434 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089607-1|AAL90345.1| 539|Drosophila melanogaster RE21692p pro... 135 2e-32
AE014296-2102|AAF49952.1| 539|Drosophila melanogaster CG5642-PA... 135 2e-32
BT011060-1|AAR31131.1| 1045|Drosophila melanogaster LD30165p pro... 30 1.6
AY545463-1|AAS55738.1| 1045|Drosophila melanogaster GST-containi... 30 1.6
AE014297-569|AAF54054.3| 1045|Drosophila melanogaster CG33546-PB... 30 1.6
X04269-1|CAA27820.1| 163|Drosophila melanogaster Sgs-5 protein. 29 3.6
AY118986-1|AAM50846.1| 163|Drosophila melanogaster LP02306p pro... 29 3.6
AE014297-2372|AAF55436.1| 163|Drosophila melanogaster CG7596-PA... 29 3.6
AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p pro... 28 6.3
AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA... 28 6.3
U35074-1|AAC13917.1| 550|Drosophila melanogaster CCF protein. 27 8.3
M25294-1|AAA17842.1| 151|Drosophila melanogaster dsx protein. 27 8.3
BT023771-1|AAZ41779.1| 550|Drosophila melanogaster LD47601p pro... 27 8.3
AY118652-1|AAM50021.1| 1331|Drosophila melanogaster SD06851p pro... 27 8.3
AY069786-1|AAL39931.1| 1638|Drosophila melanogaster SD02886p pro... 27 8.3
AE014297-2651|AAF55658.2| 1638|Drosophila melanogaster CG31212-P... 27 8.3
AE014297-674|AAF54169.1| 549|Drosophila melanogaster CG11094-PA... 27 8.3
AE014297-178|AAF52073.1| 550|Drosophila melanogaster CG2530-PA ... 27 8.3
AE014296-1955|AAF50061.2| 509|Drosophila melanogaster CG7543-PA... 27 8.3
>AY089607-1|AAL90345.1| 539|Drosophila melanogaster RE21692p
protein.
Length = 539
Score = 135 bits (327), Expect = 2e-32
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +3
Query: 39 RTLSSALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAICLVLHPQCVDESIQQVLREK 218
RT S LLY+QRTKQL+S+RSYQNDQINKQ EQMYHLLAICLVLHPQC+DESIQQVLREK
Sbjct: 305 RTFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQVLREK 364
Query: 219 NYHEKMFKMQYG 254
NYH+ MFKMQ G
Sbjct: 365 NYHDAMFKMQCG 376
Score = 82.6 bits (195), Expect = 2e-16
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Frame = +2
Query: 2 AYMMMRRYADAIPHPLFCAAIHATH*TIVLLPFLPE*SDQQTDRANVPFTGHLFGLASAV 181
AYMMMRRYADAI F + T L +DQ +A + HL +
Sbjct: 293 AYMMMRRYADAIR--TFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMY--HLLAICLV- 347
Query: 182 R**IHPA---GASRKELP*EDV*NAIWNL--GE---FESCFTFACPKFLSACPPPIE-PG 334
+HP + ++ L ++ +A++ + G+ F+S F FACP+F+S CPP ++ P
Sbjct: 348 ---LHPQCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSFFVFACPRFVSPCPPAVDAPM 404
Query: 335 ANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLK 433
+Y +D ++HQ QVFMDEVRQQK LPT RSYLK
Sbjct: 405 DDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLK 437
>AE014296-2102|AAF49952.1| 539|Drosophila melanogaster CG5642-PA
protein.
Length = 539
Score = 135 bits (327), Expect = 2e-32
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +3
Query: 39 RTLSSALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAICLVLHPQCVDESIQQVLREK 218
RT S LLY+QRTKQL+S+RSYQNDQINKQ EQMYHLLAICLVLHPQC+DESIQQVLREK
Sbjct: 305 RTFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQVLREK 364
Query: 219 NYHEKMFKMQYG 254
NYH+ MFKMQ G
Sbjct: 365 NYHDAMFKMQCG 376
Score = 82.6 bits (195), Expect = 2e-16
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Frame = +2
Query: 2 AYMMMRRYADAIPHPLFCAAIHATH*TIVLLPFLPE*SDQQTDRANVPFTGHLFGLASAV 181
AYMMMRRYADAI F + T L +DQ +A + HL +
Sbjct: 293 AYMMMRRYADAIR--TFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMY--HLLAICLV- 347
Query: 182 R**IHPA---GASRKELP*EDV*NAIWNL--GE---FESCFTFACPKFLSACPPPIE-PG 334
+HP + ++ L ++ +A++ + G+ F+S F FACP+F+S CPP ++ P
Sbjct: 348 ---LHPQCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSFFVFACPRFVSPCPPAVDAPM 404
Query: 335 ANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLK 433
+Y +D ++HQ QVFMDEVRQQK LPT RSYLK
Sbjct: 405 DDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLK 437
>BT011060-1|AAR31131.1| 1045|Drosophila melanogaster LD30165p
protein.
Length = 1045
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 168 LHPQCVDESIQQVLREKNYHEKMFKMQYGT*VNSRAALLSRA 293
+HP+C D + +V + K M Y T RA L RA
Sbjct: 86 IHPRCSDHEVNKVAQRKRLSVMMMNDAYSTTQPKRARLYERA 127
>AY545463-1|AAS55738.1| 1045|Drosophila melanogaster GST-containing
FLYWCH zinc-fingerprotein protein.
Length = 1045
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 168 LHPQCVDESIQQVLREKNYHEKMFKMQYGT*VNSRAALLSRA 293
+HP+C D + +V + K M Y T RA L RA
Sbjct: 86 IHPRCSDHEVNKVAQRKRLSVMMMNDAYSTTQPKRARLYERA 127
>AE014297-569|AAF54054.3| 1045|Drosophila melanogaster CG33546-PB,
isoform B protein.
Length = 1045
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 168 LHPQCVDESIQQVLREKNYHEKMFKMQYGT*VNSRAALLSRA 293
+HP+C D + +V + K M Y T RA L RA
Sbjct: 86 IHPRCSDHEVNKVAQRKRLSVMMMNDAYSTTQPKRARLYERA 127
>X04269-1|CAA27820.1| 163|Drosophila melanogaster Sgs-5 protein.
Length = 163
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 91 PPVPTRMIRSTNRPSKCTIYW-PFVWSCIRSALMNPSSRCFEKRTTMR 231
P + + + ST+ PSKC IY+ + W AL + RCF+ M+
Sbjct: 35 PEIESEIKNSTSVPSKCNIYYRNYQW-----ALQDCVCRCFQNECLMQ 77
>AY118986-1|AAM50846.1| 163|Drosophila melanogaster LP02306p
protein.
Length = 163
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 91 PPVPTRMIRSTNRPSKCTIYW-PFVWSCIRSALMNPSSRCFEKRTTMR 231
P + + + ST+ PSKC IY+ + W AL + RCF+ M+
Sbjct: 35 PEIESEIKNSTSVPSKCNIYYRNYQW-----ALQDCVCRCFQNECLMQ 77
>AE014297-2372|AAF55436.1| 163|Drosophila melanogaster CG7596-PA
protein.
Length = 163
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 91 PPVPTRMIRSTNRPSKCTIYW-PFVWSCIRSALMNPSSRCFEKRTTMR 231
P + + + ST+ PSKC IY+ + W AL + RCF+ M+
Sbjct: 35 PEIESEIKNSTSVPSKCNIYYRNYQW-----ALQDCVCRCFQNECLMQ 77
>AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p
protein.
Length = 844
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 18 VGTPTPYRTLSSALLYMQRTKQLFSSRSYQNDQINK 125
V T Y LS + ++RT Q FS + N +NK
Sbjct: 129 VNLQTSYLELSEMIQVLERTDQFFSDQESHNFDLNK 164
>AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA
protein.
Length = 844
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 18 VGTPTPYRTLSSALLYMQRTKQLFSSRSYQNDQINK 125
V T Y LS + ++RT Q FS + N +NK
Sbjct: 129 VNLQTSYLELSEMIQVLERTDQFFSDQESHNFDLNK 164
>U35074-1|AAC13917.1| 550|Drosophila melanogaster CCF protein.
Length = 550
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +3
Query: 51 SALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAICLVLHPQCVDESIQQVLREKNYHE 230
SAL +Q+ +Q + Q Q + +Q H+ + H Q + + QQ +++H+
Sbjct: 20 SALSALQQQQQQQQQQHSQTQQQHHHQQQQQHMYHAAVAAHQQQLLQQQQQQQHHRHHHQ 79
>M25294-1|AAA17842.1| 151|Drosophila melanogaster dsx protein.
Length = 151
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 277 LYFRVPQILIGVSPAH*TRCQLWP*CCQTPDPSLYGRGPST 399
+Y P I G AH T L C TP+P R PS+
Sbjct: 27 MYLTYPSIEQGRYGAHFTHLPLTQICPPTPEPLALSRSPSS 67
>BT023771-1|AAZ41779.1| 550|Drosophila melanogaster LD47601p
protein.
Length = 550
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +3
Query: 51 SALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAICLVLHPQCVDESIQQVLREKNYHE 230
SAL +Q+ +Q + Q Q + +Q H+ + H Q + + QQ +++H+
Sbjct: 20 SALSALQQQQQQQQQQHSQTQQQHHHQQQQQHMYHAAVAAHQQQLLQQQQQQQHHRHHHQ 79
>AY118652-1|AAM50021.1| 1331|Drosophila melanogaster SD06851p
protein.
Length = 1331
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 264 NSRAALLSRAPNSY-RRVPRPLNPVPTMAVMLSNTRPKSLWTR 389
N+RA+ P Y RR+ P P P +++L+ +RP+S TR
Sbjct: 365 NARASSEEPRPRQYGRRLEGP--PTPVRSLILAQSRPQSAPTR 405
>AY069786-1|AAL39931.1| 1638|Drosophila melanogaster SD02886p
protein.
Length = 1638
Score = 27.5 bits (58), Expect = 8.3
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 51 SALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAICLVLHPQCV--DESIQQVLRE--- 215
S LL + +Q ++ Y + + E +Y LL + DE +QQ+LRE
Sbjct: 86 SRLLASKEERQSVKAQLYNFNDLTSDREWLYDLLLSDTESDDPTITEDEYVQQLLREHVR 145
Query: 216 -----KNYHEKMFKMQY 251
KNY++K QY
Sbjct: 146 EQRQRKNYYKKAANAQY 162
>AE014297-2651|AAF55658.2| 1638|Drosophila melanogaster CG31212-PA
protein.
Length = 1638
Score = 27.5 bits (58), Expect = 8.3
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 51 SALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAICLVLHPQCV--DESIQQVLRE--- 215
S LL + +Q ++ Y + + E +Y LL + DE +QQ+LRE
Sbjct: 86 SRLLASKEERQSVKAQLYNFNDLTSDREWLYDLLLSDTESDDPTITEDEYVQQLLREHVR 145
Query: 216 -----KNYHEKMFKMQY 251
KNY++K QY
Sbjct: 146 EQRQRKNYYKKAANAQY 162
>AE014297-674|AAF54169.1| 549|Drosophila melanogaster CG11094-PA,
isoform A protein.
Length = 549
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 277 LYFRVPQILIGVSPAH*TRCQLWP*CCQTPDPSLYGRGPST 399
+Y P I G AH T L C TP+P R PS+
Sbjct: 425 MYLTYPSIEQGRYGAHFTHLPLTQICPPTPEPLALSRSPSS 465
>AE014297-178|AAF52073.1| 550|Drosophila melanogaster CG2530-PA
protein.
Length = 550
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +3
Query: 51 SALLYMQRTKQLFSSRSYQNDQINKQTEQMYHLLAICLVLHPQCVDESIQQVLREKNYHE 230
SAL +Q+ +Q + Q Q + +Q H+ + H Q + + QQ +++H+
Sbjct: 20 SALSALQQQQQQQQQQHSQTQQQHHHQQQQQHMYHAAVAAHQQQLLQQQQQQQHHRHHHQ 79
>AE014296-1955|AAF50061.2| 509|Drosophila melanogaster CG7543-PA
protein.
Length = 509
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 64 TCNALNNCSP---PVPTRMIRSTNRPSKCTIYWPFVWSCIRSALMNPSSRCFE 213
TCNAL +P P P R+ + + R + WP++ I S N S E
Sbjct: 385 TCNALEEPAPQFPPAPQRLTKWSIRRRRWRCQWPWLDERIASLSANGSRALVE 437
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,561,007
Number of Sequences: 53049
Number of extensions: 537461
Number of successful extensions: 1568
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -