Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0314
(434 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical p... 60 9e-10
U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical p... 60 9e-10
U80446-4|AAB37804.1| 443|Caenorhabditis elegans Hypothetical pr... 31 0.27
Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z68114-8|CAA92162.1| 317|Caenorhabditis elegans Hypothetical pr... 27 7.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 7.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 7.8
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 27 7.8
>U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical
protein C17G10.9a protein.
Length = 537
Score = 59.7 bits (138), Expect = 9e-10
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +3
Query: 51 SALLYMQRTK----QLFSSRSYQNDQINKQTEQMYHLLAICLVLHPQCVDESIQQVLREK 218
+ LLY+QRTK Q S +++Q D I K +Q++HLLAICL + PQ +DESI L E+
Sbjct: 306 NCLLYIQRTKSVQNQQPSKKNFQYDVIGKTWDQLFHLLAICLAIQPQRIDESIASQLSER 365
Query: 219 NYHEKMFKMQYGT*VNSRAALLSRAP 296
E+M M G R A + P
Sbjct: 366 -CGERMMHMANGNIDEFRNAFATGCP 390
Score = 51.6 bits (118), Expect = 2e-07
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2
Query: 254 NLGEFESCFTFACPKFLSACPPPIEPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLK 433
N+ EF + F CPKFLS E G N ++ + QTQ F++ + Q LP +R YLK
Sbjct: 377 NIDEFRNAFATGCPKFLSPTTVVYE-GVNQSKEPLLRQTQSFLEGIESQMALPVLRGYLK 435
>U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical
protein C17G10.9b protein.
Length = 535
Score = 59.7 bits (138), Expect = 9e-10
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +3
Query: 51 SALLYMQRTK----QLFSSRSYQNDQINKQTEQMYHLLAICLVLHPQCVDESIQQVLREK 218
+ LLY+QRTK Q S +++Q D I K +Q++HLLAICL + PQ +DESI L E+
Sbjct: 304 NCLLYIQRTKSVQNQQPSKKNFQYDVIGKTWDQLFHLLAICLAIQPQRIDESIASQLSER 363
Query: 219 NYHEKMFKMQYGT*VNSRAALLSRAP 296
E+M M G R A + P
Sbjct: 364 -CGERMMHMANGNIDEFRNAFATGCP 388
Score = 51.6 bits (118), Expect = 2e-07
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2
Query: 254 NLGEFESCFTFACPKFLSACPPPIEPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLK 433
N+ EF + F CPKFLS E G N ++ + QTQ F++ + Q LP +R YLK
Sbjct: 375 NIDEFRNAFATGCPKFLSPTTVVYE-GVNQSKEPLLRQTQSFLEGIESQMALPVLRGYLK 433
>U80446-4|AAB37804.1| 443|Caenorhabditis elegans Hypothetical
protein F56A3.2 protein.
Length = 443
Score = 31.5 bits (68), Expect = 0.27
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +3
Query: 228 EKMFKMQYGT*VNSRAALLSRAPNSYRRVPRPLNPVPTMAVMLSNTRPKSLWTRSVNKKC 407
+K + +G S+ P VP + P ++ + PKS+ RSV+ C
Sbjct: 34 DKKIRFSFGASNMSQDTTQEIIPEDTDTVPLTIPSTPALSGKFDSKTPKSVRRRSVSMSC 93
Query: 408 FRPYV 422
F P V
Sbjct: 94 FTPIV 98
>Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical
protein F13G3.1 protein.
Length = 360
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Frame = +1
Query: 25 RRRHTAPSLLRCYTCNALNNCSPPV-----PTRMIRSTNRPSKCTIYWPFVWSCIRSALM 189
+R HT+ +C C+ + + T IR ++ S+ ++ S + S+
Sbjct: 106 KRVHTSERPFKCRYCSRTSKWKADLIRHVAKTHGIRVVSKYSRSKVF-DATNSSMDSSCS 164
Query: 190 NPSSRCF--EKRTTMRRCLKCNME 255
+ S RC EKRT RC C+ E
Sbjct: 165 SDSDRCIISEKRTVFYRCQLCSFE 188
>Z68114-8|CAA92162.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.11 protein.
Length = 317
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -1
Query: 209 KHLLDGFINALRMQDQTNGQ*MVHLLGLFVDLIILVGTGGEQLF 78
KH FIN L +Q +V L +FV +I++GT E LF
Sbjct: 225 KHQRKTFINGLTLQACLP---LVSLCPIFVCYVIVIGTKSELLF 265
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 222 SSFLEAPAGWIHQRTADARPNKWPV 148
++F APA +I RT DARP + V
Sbjct: 193 ATFGNAPAAYIGARTPDARPRTYHV 217
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 222 SSFLEAPAGWIHQRTADARPNKWPV 148
++F APA +I RT DARP + V
Sbjct: 193 ATFGNAPAAYIGARTPDARPRTYHV 217
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 222 SSFLEAPAGWIHQRTADARPNKWPV 148
++F APA +I RT DARP + V
Sbjct: 193 ATFGNAPAAYIGARTPDARPRTYHV 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,733,820
Number of Sequences: 27780
Number of extensions: 264247
Number of successful extensions: 763
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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