Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0313
         (404 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9LML6 Cluster: F10K1.4 protein; n=7; Arabidopsis thali...    33   2.2  
UniRef50_A7P1U9 Cluster: Chromosome chr19 scaffold_4, whole geno...    33   2.2  
UniRef50_Q649X0 Cluster: Putative uncharacterized protein; n=1; ...    32   5.0  
UniRef50_Q0B7L5 Cluster: 5-oxopent-3-ene-1,2,5-tricarboxylate de...    31   6.6  
UniRef50_Q88WY7 Cluster: Iron chelatin ABC transporter, substrat...    31   8.7  
UniRef50_A1GD62 Cluster: Peptidase M16-like; n=2; Salinispora|Re...    31   8.7  
UniRef50_Q2U1V1 Cluster: Predicted protein; n=5; Trichocomaceae|...    31   8.7  

>UniRef50_Q9LML6 Cluster: F10K1.4 protein; n=7; Arabidopsis
           thaliana|Rep: F10K1.4 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 479

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -2

Query: 148 GIAVTVRFDYTSFALAIVESDELLHASRSW--GGDEPRR 38
           G+AV +R DY S    +V  DE+  A RS   GGDE R+
Sbjct: 404 GLAVDLRMDYVSSRGGLVTCDEIARAVRSLMDGGDEKRK 442


>UniRef50_A7P1U9 Cluster: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr19 scaffold_4, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 296

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = +2

Query: 2   NQIKPVPVYPTPATRLITTPGPGSVQQLVTFYNSQGKGSVIKPYSYSDAVKQG*TFNE 175
           +Q KP P Y    +R+  TP P  +Q+L    +  G GSV+KP S    +  G T  E
Sbjct: 196 DQQKPEPSYGGSISRIFPTP-PEMMQKLHVAVDIAGAGSVVKPPSADTPMPAGTTAPE 252


>UniRef50_Q649X0 Cluster: Putative uncharacterized protein; n=1;
           uncultured archaeon GZfos34A6|Rep: Putative
           uncharacterized protein - uncultured archaeon GZfos34A6
          Length = 355

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +2

Query: 167 FNENIKDLICLLRKYCYSIKT*DF 238
           F+E  K+L+ LL+KYC+ +K  DF
Sbjct: 45  FSEPAKELLNLLKKYCFKVKVFDF 68


>UniRef50_Q0B7L5 Cluster: 5-oxopent-3-ene-1,2,5-tricarboxylate
           decarboxylase; n=6; Proteobacteria|Rep:
           5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase -
           Burkholderia cepacia (strain ATCC 53795 / AMMD)
          Length = 291

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 90  VTSCCTL-PGPGVVMSRVAGVGYTGTGLIWL 1
           +T C TL PG  VVM   AGVG+  T  +W+
Sbjct: 234 LTECLTLEPGDVVVMGTPAGVGFARTPPVWM 264


>UniRef50_Q88WY7 Cluster: Iron chelatin ABC transporter, substrate
           binding protein; n=3; Lactobacillus|Rep: Iron chelatin
           ABC transporter, substrate binding protein -
           Lactobacillus plantarum
          Length = 356

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = +3

Query: 78  SSSSLSTIARAKEV*SNRTVTAMP*SKVKHLTKISRI*YVYCGNIVILLRL 230
           S++S S  A A +  + RTVT M  +KVK  TK++R+  ++  N  ++L L
Sbjct: 25  STASKSKTANASQSATTRTVTDMAGTKVKIPTKVTRVADLWHANNQVVLLL 75


>UniRef50_A1GD62 Cluster: Peptidase M16-like; n=2; Salinispora|Rep:
           Peptidase M16-like - Salinispora arenicola CNS205
          Length = 448

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
 Frame = +2

Query: 14  PVPVYPTPATRLITTPGPGSVQQLVTF-YNSQGKGSVIK-PYSYSDAVKQG*TFNENIKD 187
           P+PV P    R++    PGSVQ  +   + S  +      P + + AV  G  F   +  
Sbjct: 236 PIPVTPRQGRRIVLVDRPGSVQSTLRLGHPSPHRAHPDHVPMTLAGAVLGG-AFTSRLNH 294

Query: 188 LICLLRKYCYSIKT*DFFKHVFIGR 262
           LI  +R Y Y I+  DF      GR
Sbjct: 295 LIREVRGYTYGIRG-DFVSSRRFGR 318


>UniRef50_Q2U1V1 Cluster: Predicted protein; n=5;
           Trichocomaceae|Rep: Predicted protein - Aspergillus
           oryzae
          Length = 1375

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 68  GSVQQLVTFYNSQGKGSVIKPYSY 139
           GSV  +VT+ N   K +VI+PYSY
Sbjct: 90  GSVDLIVTYNNGPVKSAVIRPYSY 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,827,417
Number of Sequences: 1657284
Number of extensions: 6650252
Number of successful extensions: 17636
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17631
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)