Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0313
(404 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 23 1.1
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 22 2.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 2.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 2.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 2.0
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 21 3.5
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 6.1
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 21 6.1
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 20 8.0
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 20 8.0
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 20 8.0
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 20 8.0
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 23.0 bits (47), Expect = 1.1
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -3
Query: 285 IIMFLFFLRPMKTCLKKSQVLIE*QYFRNRHIKSLIFSLNV*PCFTASL*LYGLITL 115
I+ L F + + L K+ I+ + NR+ KS +F NV F + L L+G++ +
Sbjct: 35 ILSSLIFNQEQWSSLNKNFQFID-KKLNNRNSKSRVFYENVNFQFGSILALFGVVQI 90
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 22.2 bits (45), Expect = 2.0
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +2
Query: 5 QIKPVPVYPTP-ATRLI-TTPG 64
+++P VYPTP RL+ T PG
Sbjct: 82 RVRPPKVYPTPYGGRLVWTLPG 103
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 2.0
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +2
Query: 5 QIKPVPVYPTP-ATRLI-TTPG 64
+++P VYPTP RL+ T PG
Sbjct: 396 RVRPPKVYPTPYGGRLVWTLPG 417
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.0
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +2
Query: 5 QIKPVPVYPTP-ATRLI-TTPG 64
+++P VYPTP RL+ T PG
Sbjct: 629 RVRPPKVYPTPYGGRLVWTLPG 650
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.0
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +2
Query: 5 QIKPVPVYPTP-ATRLI-TTPG 64
+++P VYPTP RL+ T PG
Sbjct: 629 RVRPPKVYPTPYGGRLVWTLPG 650
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 21.4 bits (43), Expect = 3.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 98 NSQGKGSVIKPYSYSDAVKQG*TFNENIKDLICL 199
NS + S + SY+ +K F IKD + L
Sbjct: 48 NSDSENSEVSSNSYTPKIKSCRPFKAYIKDPLTL 81
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 20.6 bits (41), Expect = 6.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 13 ACASVPYSSDAAHHH 57
A PY S A HHH
Sbjct: 57 AARMYPYVSAAHHHH 71
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 20.6 bits (41), Expect = 6.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 13 ACASVPYSSDAAHHH 57
A PY S A HHH
Sbjct: 57 AARMYPYVSAAHHHH 71
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +1
Query: 28 PYSSDAAHHH 57
PY+S HHH
Sbjct: 47 PYASSQHHHH 56
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 165 HLTKISRI*YVYCGNIVILLRLEIFL 242
HL+ + + VY V+L LE+F+
Sbjct: 280 HLSDVRYVMVVYLLKNVVLYGLELFI 305
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 28 PYSSDAAHHH 57
PY S A HHH
Sbjct: 3 PYVSAAHHHH 12
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 28 PYSSDAAHHH 57
PY S A HHH
Sbjct: 3 PYVSAAHHHH 12
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,918
Number of Sequences: 336
Number of extensions: 1824
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8752267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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