Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0313
         (404 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   1.8  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   3.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.6  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    22   9.8  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 106  GQRKCNQTVQLQRCRKARLNI*RKYQG 186
            GQ  CN  V+ +RC + + N   ++QG
Sbjct: 1003 GQCPCNDNVEGRRCDRCKENKYDRHQG 1029


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 90   VTSCCTLPGPGVVMSRVAGVGYTGTGLI 7
            ++S    PGP V+     GVG  G  L+
Sbjct: 1096 ISSATPAPGPFVISGNGGGVGGAGAQLL 1123


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 103 PGQRKCNQTVQLQRCR 150
           PG+  C+Q +Q   CR
Sbjct: 37  PGKTTCSQCIQTTNCR 52


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 51  SPPQDLEACSSSSLSTIARAKEV 119
           SPP DL  CS+S    +  +  V
Sbjct: 32  SPPSDLGECSASPTVEVVASTSV 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,620
Number of Sequences: 2352
Number of extensions: 6904
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)