Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0310
         (295 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   1.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   3.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   9.6  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 288 QCQTRVKLNRVSFPADSPKPVP 223
           +CQ    ++ + +P   PKP+P
Sbjct: 28  ECQATPVIHFLQYPGCVPKPIP 49


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 224 GTGLGESAGKETLLSLTLV 280
           G GLG ++G   +LSL +V
Sbjct: 49  GGGLGIASGLSAMLSLVVV 67


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.4 bits (38), Expect = 9.6
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -3

Query: 89  ACLNFFTLTFRALGRN 42
           AC+      FR LG N
Sbjct: 151 ACVGLLERAFRCLGNN 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,652
Number of Sequences: 438
Number of extensions: 1547
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5994288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)