Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0309
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.54 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.54 
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   3.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   3.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   5.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.8  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +3

Query: 81  TNNTIDTDYTSRVHCQLINRSTNVKLMLKYRIDKITQGGHEFCNQSNNYSLKL 239
           TN+   T+YT +++   I  + NV    +  +D+  Q  H       N S+ +
Sbjct: 243 TNDPNKTEYTLKIYTHDIPETYNVVRKFRDVLDEFPQPKHMLIEAYTNLSMTM 295


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +3

Query: 81  TNNTIDTDYTSRVHCQLINRSTNVKLMLKYRIDKITQGGHEFCNQSNNYSLKL 239
           TN+   T+YT +++   I  + NV    +  +D+  Q  H       N S+ +
Sbjct: 243 TNDPNKTEYTLKIYTHDIPETYNVVRKFRDVLDEFPQPKHMLIEAYTNLSMTM 295


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +3

Query: 42  DGTYVGTQKRPFGTNNTIDTDYTSRVH 122
           DG  +  +K   GT      D+T  VH
Sbjct: 67  DGNTLNVEKLESGTRELTPDDFTEDVH 93


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +3

Query: 42  DGTYVGTQKRPFGTNNTIDTDYTSRVH 122
           DG  +  +K   GT      D+T  VH
Sbjct: 67  DGNTLNVEKLESGTRELTPDDFTEDVH 93


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/51 (21%), Positives = 19/51 (37%)
 Frame = -1

Query: 351 CLINHVLGSKSHNFTTEYLSTNKPYNDDVICGIAGRAVILKNNYSTDYRIH 199
           CL+      + + + +   S  K   D   C I G+   +    +  YR H
Sbjct: 64  CLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTH 114


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 252  AGRAVILKNNYSTDYRIHV 196
            AGR +    +Y  D R+HV
Sbjct: 1181 AGRGIESAKSYVVDVRVHV 1199


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 5/13 (38%), Positives = 7/13 (53%)
 Frame = +2

Query: 44  WNICRYAEKAIWN 82
           W +  Y E+  WN
Sbjct: 829 WEVMSYGERPYWN 841


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,861
Number of Sequences: 438
Number of extensions: 2611
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)