Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0308
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.65 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.1  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    23   2.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = -2

Query: 64   CVP-TYVPSAHSCNSLYK 14
            C P  YVP  H+CN+ Y+
Sbjct: 1103 CEPGQYVPDPHNCNAYYR 1120


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +1

Query: 220 IIIL*NYCTSGYPTNDVIVVRFVRTQ-VLSSKVMRLRTENMINQTNRYLLSVRDCYRTWN 396
           I+++     + Y   DV +++  + + +L SK    +   ++ +T   +  +++   T+N
Sbjct: 58  IVVILKLILAKYRQQDVTLLQITKAKNLLYSK----QIVTILKKTKSNIFILKESVDTFN 113

Query: 397 LFCNWLALCAIISGIVLNCKYI 462
               W+ LC I      +  YI
Sbjct: 114 DIFGWIILCNIFEAAAKSLIYI 135


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 211 LQNSCPPCVILSMRYFNMSLTFVDR 137
           L+ SCP C    M+     L FV +
Sbjct: 73  LRGSCPQCTPQEMKQIQKVLAFVQK 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,278
Number of Sequences: 336
Number of extensions: 3557
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)