Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0302
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 360 GDWGLQLSPINEEFLVSASHK 298
           G  G+Q+SP NE  +V++S++
Sbjct: 52  GFGGVQISPPNENLVVTSSNR 72


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 360 GDWGLQLSPINEEFLVSASHK 298
           G  G+Q+SP NE  +V++S++
Sbjct: 53  GFGGVQISPPNENLVVTSSNR 73


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 360 GDWGLQLSPINEEFLVSASHK 298
           G  G+Q+SP NE  +V++S++
Sbjct: 53  GFGGVQISPPNENLVVTSSNR 73


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 139  TTFTSSK*SSLVNFPTTPTAVKPPRV 216
            TT T+++  +  N+PT  T + PP V
Sbjct: 1067 TTSTTTR-PTTTNWPTQGTTIPPPAV 1091


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/42 (30%), Positives = 15/42 (35%)
 Frame = +1

Query: 181 PTTPTAVKPPRVGPKTSLNHSIGSRTGGVYKGQGRNQRELMT 306
           PT  T+  PP V  K         R  G     G N   L+T
Sbjct: 225 PTPSTSASPPTVNIKKESPQMQSYRPTGNITPHGSNTSSLIT 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,033
Number of Sequences: 336
Number of extensions: 2920
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)