Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0299
         (735 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    59   1e-07
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.004
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.063
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    40   0.063
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   1.4  
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   3.1  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 59.3 bits (137), Expect = 1e-07
 Identities = 32/55 (58%), Positives = 35/55 (63%)
 Frame = +1

Query: 517 LVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 681
           L+Y            RLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 49  LIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +1

Query: 121 GKCFR*CSSCDDPRISPLTSQYECPQ 198
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.063
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +3

Query: 624 PRKSPVSLFFVTTSPCREW 680
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 39.9 bits (89), Expect = 0.063
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -3

Query: 112 FHQSRTKVRGSKAIRYRPSSNRK 44
           F   RTKVRGSK IRYRPSSN K
Sbjct: 6   FRCQRTKVRGSKTIRYRPSSNHK 28


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = -3

Query: 112 FHQSRTKVRGSKAIRYRPSSNRK 44
           FH  RTKV GSK IRY PS N K
Sbjct: 6   FHCQRTKVGGSKMIRYHPSLNHK 28


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +3

Query: 534 SWNYRGCWHQTCP 572
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19



 Score = 33.1 bits (72), Expect = 7.3
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +1

Query: 661 PPRAGSG*FARLLPSLDVVAVSQAP 735
           PP+  SG  +RLL  +D+VA+SQAP
Sbjct: 46  PPKVSSGKVSRLLLPVDIVAISQAP 70


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,395,322
Number of Sequences: 1657284
Number of extensions: 13437295
Number of successful extensions: 28570
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28566
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)