Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0297
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    26   1.4  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   4.2  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   4.2  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   5.5  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   7.3  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   7.3  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       23   9.7  

>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 351 TRSVNTQKYIL*FTILRRYGSSTCNNLKY 437
           T SV++ K+   F I R YGSS  + L+Y
Sbjct: 370 TDSVDSAKFPPSFRIARSYGSSNRSGLRY 398


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 428 SQIYVYVFAKWIITINIYFMVYS 496
           ++ Y+ V+  W+  I +YF+ +S
Sbjct: 254 NETYIKVYIHWLYMIFVYFLPFS 276


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 17/63 (26%), Positives = 24/63 (38%)
 Frame = +1

Query: 124 FLSRSKYGIYVLSRCLGYKLILYKFIYKTEFLFKHLYLITVQ**CFVQNNTYYYYYQLVN 303
           F    KY I   +    Y +  Y   Y  E+L  +   I +        N YYYY+ +  
Sbjct: 191 FYGNGKYNIVYANYTATYPMDYYNNFYTEEYLNYYTEDIGL--------NAYYYYFMMDY 242

Query: 304 DFL 312
            FL
Sbjct: 243 SFL 245


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 17/63 (26%), Positives = 24/63 (38%)
 Frame = +1

Query: 124 FLSRSKYGIYVLSRCLGYKLILYKFIYKTEFLFKHLYLITVQ**CFVQNNTYYYYYQLVN 303
           F    KY I   +    Y +  Y   Y  E+L  +   I +        N YYYY+ +  
Sbjct: 191 FYGNGKYNIVYANYTATYPMDYYNNFYTEEYLNYNTEDIGL--------NAYYYYFMMDY 242

Query: 304 DFL 312
            FL
Sbjct: 243 SFL 245


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 16/63 (25%), Positives = 24/63 (38%)
 Frame = +1

Query: 124 FLSRSKYGIYVLSRCLGYKLILYKFIYKTEFLFKHLYLITVQ**CFVQNNTYYYYYQLVN 303
           F    KY +   +    Y +  Y   Y  E+L  +   I +        N YYYY+ +  
Sbjct: 191 FYGNGKYNVVYANYTATYPMDYYNNFYTEEYLNYNTEDIGL--------NAYYYYFMMDY 242

Query: 304 DFL 312
            FL
Sbjct: 243 SFL 245


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 16/63 (25%), Positives = 24/63 (38%)
 Frame = +1

Query: 124 FLSRSKYGIYVLSRCLGYKLILYKFIYKTEFLFKHLYLITVQ**CFVQNNTYYYYYQLVN 303
           F    KY +   +    Y +  Y   Y  E+L  +   I +        N YYYY+ +  
Sbjct: 191 FYGNGKYNVVYANYTATYPMDYYNNFYTEEYLNYNTEDIGL--------NAYYYYFMMDY 242

Query: 304 DFL 312
            FL
Sbjct: 243 SFL 245


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 148 IYVLSRCLGYKLILYKFIYKTEFLFKH 228
           I+  S CL     + +F Y T+F F++
Sbjct: 25  IFASSLCLTTAQTVQQFAYNTDFFFRN 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,724
Number of Sequences: 2352
Number of extensions: 12479
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)