Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0297
         (729 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-3|CAB16508.1|  482|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF036688-8|AAB88314.2|  482|Caenorhabditis elegans Hypothetical ...    29   4.5  
AC024751-4|AAK21505.1|  425|Caenorhabditis elegans Hypothetical ...    29   4.5  
U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical p...    28   7.9  

>Z99281-3|CAB16508.1|  482|Caenorhabditis elegans Hypothetical
           protein Y57G11C.6 protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 347 IDTFCQYSKVYIMIHYFKK 403
           +D+FCQY  +YI + YF K
Sbjct: 417 VDSFCQYCSLYISLLYFIK 435


>AF036688-8|AAB88314.2|  482|Caenorhabditis elegans Hypothetical
           protein C24D10.1 protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 347 IDTFCQYSKVYIMIHYFKK 403
           +D+FCQY  +YI + YF K
Sbjct: 417 VDSFCQYCSLYISLLYFIK 435


>AC024751-4|AAK21505.1|  425|Caenorhabditis elegans Hypothetical
           protein Y18H1A.1 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 347 IDTFCQYSKVYIMIHYFKK 403
           +D+FCQY  +YI + YF K
Sbjct: 360 VDSFCQYCSLYISLLYFIK 378


>U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical
           protein R09F10.1 protein.
          Length = 383

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 531 QLFRDIILK*TMSNNKIKKFQFRYRVHL 614
           Q+F D ILK       +++F++RY++ L
Sbjct: 80  QMFNDFILKFDRKYTSVEEFEYRYQIFL 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,735,176
Number of Sequences: 27780
Number of extensions: 261900
Number of successful extensions: 405
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)