Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0291
(306 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0490 + 22672241-22674679 31 0.14
02_01_0382 - 2772378-2773544 29 0.55
08_02_0623 - 19429029-19430207 28 1.7
03_06_0428 + 33860982-33861321,33861410-33861999,33862520-33862582 28 1.7
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535... 27 2.2
03_02_0662 - 10250235-10250433,10250692-10253105 27 2.2
01_06_0265 - 28011181-28011240,28011298-28011375,28011493-280118... 27 2.2
12_01_0686 - 5855216-5858263 27 2.9
05_07_0029 - 27163121-27163818,27163992-27164067,27164184-271658... 27 2.9
04_04_0623 + 26669284-26669421,26670906-26671564,26671948-266721... 27 2.9
01_01_0707 - 5453933-5454619 27 2.9
07_01_0804 - 6291265-6291765 27 3.8
04_03_1020 - 21761297-21761555,21761630-21761739,21762402-217626... 27 3.8
03_01_0319 - 2499470-2499598,2499681-2499746,2499830-2499937,250... 27 3.8
12_01_0171 - 1268803-1269500,1271491-1271567,1271941-1272065,127... 26 5.1
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 26 5.1
09_02_0389 - 8456957-8459917,8461941-8462267 26 5.1
07_03_0476 - 18547223-18548187,18548743-18549958 26 5.1
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 26 5.1
06_01_0728 - 5356400-5356676,5356888-5357090,5357181-5357474,535... 26 5.1
03_04_0198 - 18381668-18381830,18381903-18382060,18382164-183821... 26 5.1
03_01_0245 + 1916718-1917443,1917534-1917719 26 5.1
02_05_0837 + 32110008-32110079,32110200-32110448 26 5.1
10_08_0601 + 19103745-19105162,19105253-19105717,19106314-19106539 26 6.7
05_06_0098 + 25560158-25560925 26 6.7
03_05_0893 + 28566436-28566501,28566624-28566903,28567002-285671... 26 6.7
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 26 6.7
03_01_0080 - 640806-641146,642484-642700,642795-642952,644057-64... 26 6.7
02_03_0212 - 16460665-16460766,16460971-16461298,16461379-164615... 26 6.7
02_02_0447 + 10363077-10363245,10363419-10363519,10363947-103641... 26 6.7
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 26 6.7
01_06_0482 - 29672720-29673854,29673941-29676267 26 6.7
12_01_0240 + 1801797-1802014,1802314-1802411,1802556-1802638,180... 25 8.9
11_01_0774 - 6464482-6466684,6467214-6467920,6467928-6468152 25 8.9
08_02_1172 + 24898290-24899141,24900864-24901328 25 8.9
08_02_1097 + 24284494-24284496,24284946-24285407,24285476-242864... 25 8.9
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 25 8.9
08_01_0070 + 490655-493165 25 8.9
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743... 25 8.9
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 25 8.9
05_07_0071 - 27481876-27482737,27484328-27484950 25 8.9
04_01_0352 - 4619946-4619984,4620062-4620133,4621515-4621880,462... 25 8.9
03_02_1005 - 13136999-13137467,13137871-13138050,13138422-131385... 25 8.9
02_01_0371 + 2664488-2664862,2664973-2665059,2665155-2665267,266... 25 8.9
01_06_1375 + 36753529-36753531,36753782-36753839,36754133-367544... 25 8.9
01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707 25 8.9
>01_05_0490 + 22672241-22674679
Length = 812
Score = 31.5 bits (68), Expect = 0.14
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 91 RPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPP 234
+P + + T+T P L R+W + E+VLEQ S + MP PP
Sbjct: 296 QPQQPVETVTPTPPPLAR-SRRWNPEMLEVVLEQESRVEETTMPPPPP 342
>02_01_0382 - 2772378-2773544
Length = 388
Score = 29.5 bits (63), Expect = 0.55
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 205 SSSAMPGTPPSSSSCSQRHHK 267
+S P +PPSSS+ S+RHH+
Sbjct: 24 ASGKAPTSPPSSSNASRRHHQ 44
>08_02_0623 - 19429029-19430207
Length = 392
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 211 SAMPGTPPSSSSCSQRHHKTEQTHS 285
+A PPSSS+ S H T THS
Sbjct: 2 AAASNVPPSSSTSSSSPHNTTSTHS 26
>03_06_0428 + 33860982-33861321,33861410-33861999,33862520-33862582
Length = 330
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 178 LVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTH 282
L L S++PS+S PG+PP+++ S H H
Sbjct: 168 LALAPSTSPSAS--PGSPPAATPSSAPRHDAHPAH 200
>11_08_0007 +
27551173-27551828,27552071-27552282,27553371-27553550,
27555154-27556187
Length = 693
Score = 27.5 bits (58), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Frame = -2
Query: 191 CSNTSSGTSYSHCRCT---STNEF--GSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGY 27
C N ++G Y C C+ S N + G +N+ EGP SR + GGY
Sbjct: 261 CVNATNGKGYL-CNCSAGYSGNPYVTGGCININECELRREGPAMYPCYSGSRCYDTEGGY 319
Query: 26 CCK 18
CK
Sbjct: 320 KCK 322
>03_02_0662 - 10250235-10250433,10250692-10253105
Length = 870
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 119 VNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCK 18
V ++ D GP+ + L +DS++H + G CC+
Sbjct: 814 VAMVGDLADALGPNIKLLFKDSKFHSELLGQCCQ 847
>01_06_0265 -
28011181-28011240,28011298-28011375,28011493-28011802,
28012913-28013533,28013733-28013818
Length = 384
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 181 VLEQSSAPSSSAMPGTPPSSSSCS 252
+L +SSAP+ MP PPS+++ S
Sbjct: 183 ILRRSSAPAEKLMPPPPPSTTTGS 206
>12_01_0686 - 5855216-5858263
Length = 1015
Score = 27.1 bits (57), Expect = 2.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +1
Query: 7 WCDHLQQYPPIHRWYLLSL-HSSLQ---CGPSRPHRSLRTLTLLPNSL 138
WCDH+ +Y P + +LSL + SL C RSL T+ L N L
Sbjct: 233 WCDHIAKYTP--KLQVLSLPYCSLSGPVCASFAAMRSLTTIELHYNLL 278
>05_07_0029 -
27163121-27163818,27163992-27164067,27164184-27165896,
27166285-27166364,27166516-27166684
Length = 911
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 221 GIADDEGAEDCSNTSSGTSYSHCRCTSTNEFG 126
G D +E+C+ GT+ + RC+ TN FG
Sbjct: 684 GFRDRRRSENCTMQQDGTNKRNSRCSETN-FG 714
>04_04_0623 +
26669284-26669421,26670906-26671564,26671948-26672140,
26672220-26672284,26672399-26672609,26673284-26673515,
26674463-26674521,26674651-26674680,26674761-26674850
Length = 558
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 4 HWCDHLQQYPPIHRWYLLS 60
HWC Q P IHR++L S
Sbjct: 516 HWCQLEQSAPTIHRFFLPS 534
>01_01_0707 - 5453933-5454619
Length = 228
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 181 VLEQSSAPSSSAMPGTPPSSSSCSQRH--HKTEQTHSLRQGETQ 306
V+ PSSS +PP++ + H H+ +Q S R+ + Q
Sbjct: 128 VMHHHKHPSSSTSTSSPPAAPPPDEHHPRHEPQQPESSREDDQQ 171
>07_01_0804 - 6291265-6291765
Length = 166
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 230 GVPGIADDEGA-EDCSNTSSGTSYSHCRCTSTN 135
G PG A DE +DC + S CRC++ N
Sbjct: 67 GAPGGAVDEQLRQDCCRQLAAVDDSWCRCSALN 99
>04_03_1020 -
21761297-21761555,21761630-21761739,21762402-21762635,
21762710-21762817,21762910-21762969,21763549-21763624,
21763710-21763870,21764485-21764547,21764657-21764744,
21765062-21765592,21766344-21766783
Length = 709
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 233 GGVPGIADDEGAEDCSNTSS--GTSYSHCRCTSTNEFGSRVNVLSD 102
GGV G A E CS+ SS T CR T F N+ SD
Sbjct: 118 GGVAGDASSEELSVCSHDSSDEATDQQVCRSTDPASFVRGRNMPSD 163
>03_01_0319 -
2499470-2499598,2499681-2499746,2499830-2499937,
2500125-2500259,2500763-2500840,2500994-2501044,
2501805-2501879,2501975-2502037,2503048-2503137,
2503215-2503406,2503498-2503591,2503776-2504279,
2504415-2504614,2504712-2504756,2505023-2505082,
2505476-2505520,2505858-2505941,2506121-2506318,
2506960-2507667
Length = 974
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSS-CSQRHHKTEQTHSLRQGETQ 306
SSAPSS + GT SSSS SQ H Q +R G Q
Sbjct: 147 SSAPSSPVLSGTSTSSSSPLSQIKH---QARHVRTGSFQ 182
>12_01_0171 -
1268803-1269500,1271491-1271567,1271941-1272065,
1272146-1272234,1272851-1272936,1273509-1273765
Length = 443
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSS 246
SS+PS+S+ P +P SSSS
Sbjct: 11 SSSPSASSSPSSPSSSSS 28
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSS 246
SS+PS+S+ P +P SSSS
Sbjct: 11 SSSPSASSSPSSPSSSSS 28
>09_02_0389 - 8456957-8459917,8461941-8462267
Length = 1095
Score = 26.2 bits (55), Expect = 5.1
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -2
Query: 230 GVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV--------LSDRCGLEGPHC 75
G+ + D+ A++ +N +S + +H ++ S+V V LS CGL+ P C
Sbjct: 688 GIDRVPDESRAQE-ANLASKSHLTHLELCGSSTSDSQVFVPEEEQDRWLSVLCGLQPPQC 746
Query: 74 RELCRDSRYH 45
E + + Y+
Sbjct: 747 LEYLKIASYY 756
>07_03_0476 - 18547223-18548187,18548743-18549958
Length = 726
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQR 258
S+ PS + PG PP+ + C R
Sbjct: 327 STGPSGTPRPGPPPTRTGCQAR 348
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 172 PELVLEQSSAPSSSAMPGTPPSSSS 246
P + L SSA +SS+MPGT + S
Sbjct: 177 PRIPLPSSSAGASSSMPGTEEAGPS 201
>06_01_0728 -
5356400-5356676,5356888-5357090,5357181-5357474,
5357940-5358063,5358157-5359496
Length = 745
Score = 26.2 bits (55), Expect = 5.1
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 88 SRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCSQRHH 264
S PH L P S L++R+ P+ + +AP SSA S+SS + H
Sbjct: 64 SSPHAPSSRPPLPPASAALLRRRSSLTKPKSRFVEPAAPPSSAAAAAASSTSSHASPAH 122
>03_04_0198 -
18381668-18381830,18381903-18382060,18382164-18382199,
18382344-18382439,18382632-18382709,18382921-18383073,
18383261-18383365
Length = 262
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 65 CRDSRYHLCMGGYCCKW 15
CRD Y GG CKW
Sbjct: 241 CRDRYYRALAGGQYCKW 257
>03_01_0245 + 1916718-1917443,1917534-1917719
Length = 303
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 190 QSSAPSSSAMPGTPPSSSSCSQRHHKTEQ 276
QSSAP+++ P TP + +C R T Q
Sbjct: 125 QSSAPAAARTPRTPTTQRACYVRGTGTAQ 153
>02_05_0837 + 32110008-32110079,32110200-32110448
Length = 106
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -2
Query: 260 WR*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGS 123
W+ + +GG+ + + + D SSG S C T FGS
Sbjct: 32 WQLRGVCNDGGLSTVVEATSSGDGKLISSGAFMSTTNCNGTTYFGS 77
>10_08_0601 + 19103745-19105162,19105253-19105717,19106314-19106539
Length = 702
Score = 25.8 bits (54), Expect = 6.7
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 248 QLLLEGGVPGIADDEGAEDCSNTSSGTSYSHC-RC-TSTNEFGSRVN 114
Q LE GVP I G + S +HC RC +EFG N
Sbjct: 293 QFALERGVPAIIGVMGKQRLPYPSRSFDMAHCSRCLIPWHEFGEHFN 339
>05_06_0098 + 25560158-25560925
Length = 255
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSS 246
SS+PSS P PPSSSS
Sbjct: 25 SSSPSSHRPPPPPPSSSS 42
>03_05_0893 +
28566436-28566501,28566624-28566903,28567002-28567188,
28567353-28567423,28567523-28567600,28567687-28567774,
28567875-28567930,28568054-28568121
Length = 297
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = -2
Query: 203 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYC 24
G DCS+ S CR +G ++ + PHC E ++ +C C
Sbjct: 202 GKTDCSSCHSSYGIL-CRACLKVRYGEDMDEVRKNKNWMCPHCIEEKGTKKFWICNSSIC 260
Query: 23 CK 18
K
Sbjct: 261 LK 262
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 184 LEQSSAPSSSAMPGTPPSSSSCS 252
L+ S+ SS+ G+PPSS+S S
Sbjct: 1121 LDSSAGADSSSSTGSPPSSTSSS 1143
>03_01_0080 -
640806-641146,642484-642700,642795-642952,644057-645062
Length = 573
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 137 WCWCSDSGSSWFRSWYWNSL 196
WCWCSD S +W L
Sbjct: 157 WCWCSDYALSHQGRLWWVDL 176
>02_03_0212 -
16460665-16460766,16460971-16461298,16461379-16461502,
16461576-16461825,16462185-16462265,16463030-16463114,
16463200-16463321,16463865-16464672,16464775-16465027,
16465998-16466796
Length = 983
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 172 PELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSL 288
P L SS P +S + +SSS HH THSL
Sbjct: 48 PRPTLRSSSLPPASTPSPSSSASSSSGSLHH-LHPTHSL 85
>02_02_0447 +
10363077-10363245,10363419-10363519,10363947-10364140,
10364223-10364634
Length = 291
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 194 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSD 102
+CS TS G + +C ST S V LSD
Sbjct: 224 ECSTTSGGGNSCAAKCASTYNSKSSVCQLSD 254
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQRHHKT 270
SS+PS+S+ T SSS S R HK+
Sbjct: 245 SSSPSNSSGGSTARDSSSPSSRKHKS 270
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 25.8 bits (54), Expect = 6.7
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +1
Query: 52 LLSLHSSLQCGPSRPHRSLRTLTLLPNSLVLVQRQWE*LVP-----ELVLEQSSAPSSSA 216
+++LH +L S R R+L L S+ R L P +L+ SS+ SSSA
Sbjct: 29 IVTLHKALSLDHSASSRRRRSLPLPAPSVANQARHKPRLKPSSSTRKLLPSASSSSSSSA 88
Query: 217 MPGTPPSSSSCSQRHHKTEQTH 282
SSSS + T +H
Sbjct: 89 AAAASTSSSSSFWKKSLTAISH 110
>12_01_0240 +
1801797-1802014,1802314-1802411,1802556-1802638,
1802730-1802856,1803168-1803231,1803347-1803444,
1803526-1803610,1803723-1803846,1804153-1804254,
1804869-1804933,1805435-1805516,1805981-1806064
Length = 409
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 166 LVPELVLEQSSAPSSSAMPGTPPSSSS 246
L P V S+APS+ A PSSSS
Sbjct: 11 LPPAAVASSSAAPSTDAQAQRSPSSSS 37
>11_01_0774 - 6464482-6466684,6467214-6467920,6467928-6468152
Length = 1044
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 86 GPHCRELCRDSRYHL 42
GP+C +LC YHL
Sbjct: 423 GPNCEDLCNRLHYHL 437
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 16 HLQQYPPIHRWYLLSLHSSLQCGPSRPHR-SLRTLTLLP 129
H QYPP ++ +H Q PS P R +L L+L P
Sbjct: 62 HHHQYPPAAFFHPPPVHQQHQAPPSPPLREALPLLSLSP 100
>08_02_1097 +
24284494-24284496,24284946-24285407,24285476-24286450,
24286566-24286655,24286760-24287021,24287447-24287472
Length = 605
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 179 WYWNSLRLPHHRLCQEPL 232
WY + R HRL +EPL
Sbjct: 573 WYGDKCRYKQHRLAREPL 590
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 25.4 bits (53), Expect = 8.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +1
Query: 64 HSSLQCGPSRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSS 243
H SL+ P + L N +L R+ L ++ SS PSS+A P P
Sbjct: 471 HVSLELDIPAPE-GIELLGDAVNQFILWHRRDIILSAAVLAAGSSTPSSAAAPAPPSPPE 529
Query: 244 SCSQRH 261
S RH
Sbjct: 530 PPSPRH 535
>08_01_0070 + 490655-493165
Length = 836
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 133 SLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCS 252
S +L+ +W V + L +S+ SSSA TPP++ S S
Sbjct: 624 SNILLDGEWTAKVSDFGLSLASSSSSSA-TATPPAACSTS 662
>07_03_1027 -
23371826-23372006,23372110-23372171,23372595-23374335,
23374609-23374704,23374967-23375043,23376807-23377307
Length = 885
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 166 LVPELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQ 276
L P V A MP PP +SC Q EQ
Sbjct: 47 LTPAPVATAEDAARGGKMPPPPPLPTSCEQEEACVEQ 83
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 217 MPGTPPSSSSCSQRHHKTEQTHSLRQGETQ 306
M G P S +H+ ++ L QGET+
Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLNQGETE 30
>05_07_0071 - 27481876-27482737,27484328-27484950
Length = 494
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 17 TCSSTHPYTDGTCCPYTALCS 79
TC ST P++ C TA CS
Sbjct: 184 TCKSTIPFSLANCSSSTAACS 204
>04_01_0352 -
4619946-4619984,4620062-4620133,4621515-4621880,
4622240-4622713
Length = 316
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 187 EQSSAPSSSAMPGTPPSSSSCS 252
E+ S P+SSA P P+SS+ S
Sbjct: 53 EKRSLPASSASPSPSPTSSAAS 74
>03_02_1005 -
13136999-13137467,13137871-13138050,13138422-13138551,
13138651-13138738,13139316-13139660
Length = 403
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +1
Query: 145 VQRQWE*LVPELV-LEQSSA----PSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQGETQ 306
V R W + E+V + ++S P S PG + C R ++T QT+ L G T+
Sbjct: 86 VCRSWRGITKEIVRVPEASGKLTFPISLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLTE 144
>02_01_0371 +
2664488-2664862,2664973-2665059,2665155-2665267,
2665506-2665634,2666688-2666793,2667296-2667367,
2667702-2667806
Length = 328
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +1
Query: 178 LVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQG 297
++ +P+ A+ G PPS++ C T +R+G
Sbjct: 213 VITSSEGSPNWGAVEGRPPSAAECHHCGISAASTPMMRRG 252
>01_06_1375 +
36753529-36753531,36753782-36753839,36754133-36754434,
36754905-36755285
Length = 247
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCR---CTSTNEFGSRVNVLSDRC 96
V IA + G +CSNT+ TS+ C++T+ + S RC
Sbjct: 71 VVSIASEHGNAECSNTTKETSFQSGMSRICSATSIIQWNKQMSSMRC 117
>01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707
Length = 293
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 43 RWYLLSLHSSLQCGPSRPH 99
RWY++ HSSL P+ PH
Sbjct: 272 RWYMVHHHSSLMADPA-PH 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,473,155
Number of Sequences: 37544
Number of extensions: 193977
Number of successful extensions: 1149
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -