Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0291
(306 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 9e-12
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.14
SB_30565| Best HMM Match : Metallothio (HMM E-Value=1.8) 30 0.32
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.75
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.99
SB_16478| Best HMM Match : C2 (HMM E-Value=2.2e-13) 29 0.99
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 29 0.99
SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26) 29 0.99
SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25) 29 0.99
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 28 1.7
SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3) 28 1.7
SB_5030| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_41598| Best HMM Match : HLH (HMM E-Value=2.2) 28 1.7
SB_6075| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_28756| Best HMM Match : C1_4 (HMM E-Value=0.095) 27 2.3
SB_35197| Best HMM Match : SAP (HMM E-Value=3.2) 27 3.0
SB_19802| Best HMM Match : fn3 (HMM E-Value=0) 27 3.0
SB_39696| Best HMM Match : DUF536 (HMM E-Value=5) 27 3.0
SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39) 27 3.0
SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 27 4.0
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 27 4.0
SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_48571| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_24361| Best HMM Match : 7tm_1 (HMM E-Value=9.7e-40) 27 4.0
SB_11973| Best HMM Match : Cupin_1 (HMM E-Value=3.4) 27 4.0
SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14) 26 5.3
SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.3
SB_34768| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.3
SB_15221| Best HMM Match : ASC (HMM E-Value=0.0016) 26 5.3
SB_5263| Best HMM Match : C1_1 (HMM E-Value=1) 26 5.3
SB_58855| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0) 26 7.0
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 26 7.0
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5) 26 7.0
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 26 7.0
SB_31164| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 26 7.0
SB_4072| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_2951| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 25 9.2
SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_47160| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_29029| Best HMM Match : C1_1 (HMM E-Value=1) 25 9.2
SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.2
>SB_58279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 65.3 bits (152), Expect = 9e-12
Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 ALVRPLAAVPTHTQMVPAVPTQLS-AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXX 179
A +RP + +VPA P + A R FQT+S +D+DSAAKF
Sbjct: 62 AAIRPQSQALVKA-VVPASPLLGALASRGFQTSSAVQDVDSAAKFIGAGAATVGAAGSGA 120
Query: 180 XXXXXFGSLIIGYARNPSLKQQLFS 254
FGSLIIGYARNPSLKQQLFS
Sbjct: 121 GIGTVFGSLIIGYARNPSLKQQLFS 145
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1
Query: 306 LGFALSEAMGLFCLMMA 256
LGFALSEAMGLFCLMMA
Sbjct: 149 LGFALSEAMGLFCLMMA 165
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 31.5 bits (68), Expect = 0.14
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 172 PELVLEQSSAP--SSSAMPGTPPSSSSCSQRHHKTEQTHS 285
P +QS+ P SSSA PGTPP ++ S + TE + S
Sbjct: 1038 PSPGFQQSTLPPQSSSAQPGTPPQNAKNSTKATSTEPSQS 1077
>SB_30565| Best HMM Match : Metallothio (HMM E-Value=1.8)
Length = 565
Score = 30.3 bits (65), Expect = 0.32
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 134 EFGSRVNVLSDRCGLEGPHCR-ELCRDSRYHLCMGG 30
E R NVLSD GLE CR LC + + C G
Sbjct: 76 EASQRCNVLSDAPGLETESCRCTLCDERGFSACRSG 111
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 29.1 bits (62), Expect = 0.75
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 95 GLEGPHCRELCRDSRYHLCMG-GYCCKWSHQC 3
G G C +LC+ +++C G G C +W+ C
Sbjct: 5392 GYWGEDCGKLCKGGIWNVCNGHGTCNRWTGDC 5423
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 28.7 bits (61), Expect = 0.99
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -2
Query: 239 LEGGVPGIADDEGAEDCSNTS---SGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRE 69
L G + G + ++T S T + H CT ++ + L C + +CR
Sbjct: 1740 LPGSIAGYTNTNSGAAANSTDIPESRTCFDHDECTQYSQVQCNEDWLKINCPKKCKYCRP 1799
Query: 68 LCRDS 54
+C D+
Sbjct: 1800 VCEDT 1804
>SB_16478| Best HMM Match : C2 (HMM E-Value=2.2e-13)
Length = 186
Score = 28.7 bits (61), Expect = 0.99
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 4 HWCDHLQQYPPIHRWY-LLSLHSSLQCGPSRPHRSLRTL 117
HW + + PI RW+ L H+SL P+RP+R+ + +
Sbjct: 129 HWNEAMTAKKPIARWHSLREFHNSLL--PTRPNRTSKPI 165
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 28.7 bits (61), Expect = 0.99
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -2
Query: 239 LEGGVPGIADDEGAEDCSNTS---SGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRE 69
L G + G + ++T S T + H CT ++ + L C + +CR
Sbjct: 64 LPGSIAGYTNTNSGAAANSTDIPESRTCFDHDECTQYSQVQCNEDWLKINCPKKCKYCRP 123
Query: 68 LCRDS 54
+C D+
Sbjct: 124 VCEDT 128
>SB_48688| Best HMM Match : Ldl_recept_a (HMM E-Value=7.8e-26)
Length = 351
Score = 28.7 bits (61), Expect = 0.99
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 17 TCSSTHPYTDGTCCPYTALCSAV 85
+CSS H DGTC ++ C+ V
Sbjct: 111 SCSSRHACADGTCVTWSLTCNGV 133
>SB_30577| Best HMM Match : Ldl_recept_a (HMM E-Value=2.8e-25)
Length = 147
Score = 28.7 bits (61), Expect = 0.99
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 17 TCSSTHPYTDGTCCPYTALCSAV 85
+CSS H DGTC ++ C+ V
Sbjct: 111 SCSSRHACADGTCVTWSLTCNGV 133
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 172 PELVLEQSSAPSSSAMPGTPPSSSSCS 252
P L SSA SS++ PGT SSSS S
Sbjct: 873 PSLSSRLSSASSSASPPGTTTSSSSSS 899
>SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3)
Length = 374
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 178 LVLEQSSAPSSSAMPGTPPSSSSCSQ 255
L+ E SAP+ +A P P +S++C+Q
Sbjct: 177 LLHEDRSAPAKAAPPSPPEASATCTQ 202
>SB_5030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 7/34 (20%)
Frame = +2
Query: 158 GSSWFRSWYWNSLR--LPHH-----RLCQEPLPQ 238
G +WF SW W + LPH+ + C E LP+
Sbjct: 261 GENWFLSWIWPKITSPLPHNGTDYTQACNEELPK 294
>SB_41598| Best HMM Match : HLH (HMM E-Value=2.2)
Length = 519
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 152 RCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRY 48
R T T +FG +VN+ S LEG R+ D+ +
Sbjct: 16 RATFTKDFGCQVNICSASASLEGEIQRQRNTDTNF 50
>SB_6075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQRHH 264
SS+ SSS+ + PSSSS +RHH
Sbjct: 24 SSSSSSSSSMSSSPSSSSQRRRHH 47
>SB_28756| Best HMM Match : C1_4 (HMM E-Value=0.095)
Length = 201
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 74 RELCRDSRYHLCMGGYCCKWSHQ 6
R CR HLC+G C+W Q
Sbjct: 173 RNGCRKCDVHLCVGDCFCEWHQQ 195
>SB_35197| Best HMM Match : SAP (HMM E-Value=3.2)
Length = 323
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 178 LVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTH 282
+++ +S+ SSSA + SSSS S HH + H
Sbjct: 181 IIIIITSSSSSSAAAASSSSSSSSSSSHHHYHRHH 215
>SB_19802| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1075
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 26 STHPYTDGTCCPYTALC 76
STHP D TCC LC
Sbjct: 964 STHPAEDPTCCRLRTLC 980
>SB_39696| Best HMM Match : DUF536 (HMM E-Value=5)
Length = 238
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 118 TLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCS 252
TLL + L++ LV EL L+++ SS +PG S+ S S
Sbjct: 165 TLLEDETTLLEDVTTLLVDELGLDETPITSSPTLPGGKGSTKSAS 209
>SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 172 PELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQG 297
PE+ L + S+P+ PGT +SSS + E+ QG
Sbjct: 537 PEVSLPEMSSPNEPEAPGTDQASSSNVDQSETCEKERDGDQG 578
>SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39)
Length = 1607
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 178 LVLEQSSAPSSSAMPGTPPSSSSCSQ 255
L+ E SAP+ A P P +S++C+Q
Sbjct: 648 LLHEDRSAPAKPAPPSPPEASATCTQ 673
>SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 1413
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 233 GGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
GG+ G+A D N T Y C C + E S++++
Sbjct: 1116 GGIWGLAVAVSIPDFLNNYFSTQYKKCLCPFSLELASKLSI 1156
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 145 VQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCS 252
VQ QWE + EL L+ S+ + P T SSSS S
Sbjct: 81 VQDQWETVPDELQLKVISSSFPAEFPATVGSSSSDS 116
>SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 122 CCQIHWCWCSDSGS 163
CCQ H W SDSGS
Sbjct: 255 CCQGHLTWRSDSGS 268
>SB_48571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 182 TSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDS 54
T+ S + R T T FG +VN+ LEG R+ D+
Sbjct: 16 TNENVSENTSRATFTKNFGCQVNICGASASLEGEIQRQRNTDT 58
>SB_24361| Best HMM Match : 7tm_1 (HMM E-Value=9.7e-40)
Length = 430
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -2
Query: 233 GGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
GG+ G+A D N T Y C C + E S++++
Sbjct: 239 GGIWGLAVAVSIPDFLNNYFSTQYKKCLCPFSLELASKLSI 279
>SB_11973| Best HMM Match : Cupin_1 (HMM E-Value=3.4)
Length = 394
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = +1
Query: 64 HSSLQCGPSRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSS 243
H +Q P+ + +T++ P + + + +VP V QS S + G+P +++
Sbjct: 147 HMQIQAQPAGSAVTAQTVSAQPTMVTVASMASQPIVPSAVTAQSLIHSQRTLAGSPSTTA 206
>SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 226 TPPSSSSCSQRHHKTEQTHS 285
+PPS+SS + HH T HS
Sbjct: 118 SPPSTSSSQRHHHHTYHHHS 137
>SB_15354| Best HMM Match : NHL (HMM E-Value=4.4e-14)
Length = 1071
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 212 DDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRV 117
D+ A CSN ++ + RC NEF R+
Sbjct: 191 DENDAVICSNCDENSALADARCLDCNEFLCRM 222
>SB_35576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Frame = -2
Query: 161 SHCRCTSTN---EFGSRVNVL-----SDRC--GLEGPHCRELCRDSRYHLCMGGYCCKWS 12
++C+C S+ E G ++V+ +D C + C C Y C+ G C KW
Sbjct: 1151 ANCKCLSSKFACESGECIDVVGLCDGTDDCKDASDESRCDHKCSKDEYQ-CVSGACVKWP 1209
Query: 11 HQC 3
C
Sbjct: 1210 LTC 1212
>SB_34768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 187 EQSSAPSSSAMPGTPPSSSSCS 252
EQSSA S +P TPP S + S
Sbjct: 406 EQSSASVSPLVPSTPPCSQNVS 427
>SB_15221| Best HMM Match : ASC (HMM E-Value=0.0016)
Length = 490
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCS 252
SS+PSS+ P PP SSS S
Sbjct: 214 SSSPSSAPSPQPPPPSSSSS 233
>SB_5263| Best HMM Match : C1_1 (HMM E-Value=1)
Length = 407
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 167 SYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRY 48
S S R T T +FG +VN+ LEG R+ D+ +
Sbjct: 128 SESTSRATFTKDFGCQVNICCASASLEGEIQRQRNTDTDF 167
>SB_58855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 145 VQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCSQRHH 264
VQ QW+ + EL L+ S+ + P T SSSS S +
Sbjct: 50 VQDQWKTVPDELQLKVISSSFPAEFPATVGSSSSDSSNRY 89
>SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 802
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/62 (24%), Positives = 24/62 (38%)
Frame = -2
Query: 203 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYC 24
G D + G+ CR ++ + + C C +LCRD+ GGY
Sbjct: 278 GCRDLCINTPGSFMCQCRQGYVLANDNKTCINLNECATRKHRCEQLCRDTD-----GGYY 332
Query: 23 CK 18
C+
Sbjct: 333 CE 334
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 15 PLAAVPTHTQMVPAVPTQLSAVRSFQTTSVTKDIDSA 125
P +AVPT P V LSA +TS + I SA
Sbjct: 570 PSSAVPTPATAPPPVAATLSAPPPLDSTSGSSTISSA 606
>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
Length = 279
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 196 SAPSSSAMPGTPPSSSSCSQRHH 264
S+ SS ++P P SSS S HH
Sbjct: 113 SSSSSQSLPPPPSSSSQPSSHHH 135
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -2
Query: 161 SHCRCT-STNEFGSRVNVLSDRC----GLEGPHCRELCRDSRY 48
S CRC S + + ++ +C G GP C E C + RY
Sbjct: 737 SSCRCDPSKTDVKKPCDHVTGQCNCRPGYRGPRCLEQCPEGRY 779
>SB_31164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 145 VQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCSQRHH 264
VQ QW+ + EL L+ S+ + P T SSSS S +
Sbjct: 51 VQDQWKTVPDELQLKVISSSFPAEFPATVGSSSSDSSNRY 90
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 97 HRSLRTLTLLPNSLVLVQRQWE*LVPELVLE 189
H+S + LLP S+VL+ W V + +LE
Sbjct: 122 HKSASIMVLLPASMVLLSIAWSPKVQKKMLE 152
>SB_4072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1364
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 145 VQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCSQRHH 264
VQ QW+ + EL L+ S+ + P T SSSS S +
Sbjct: 59 VQDQWKTVPDELQLKVISSSFPAEFPATVGSSSSDSSNRY 98
>SB_2951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 73 LQCGPSRPHRSLRTLTLLPNSLVLVQRQW 159
+ C P PH + LTL P LV W
Sbjct: 28 ISCTPVHPHPNATVLTLTPLKKSLVDLTW 56
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 25.4 bits (53), Expect = 9.2
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +2
Query: 11 ATTCSSTHPYTDGTCCPYTALCSA-VLPDHIGH*GH*LCCQIHWCWCSDSGSSWFRSWYW 187
+++ SS Y C P+ C V P LC Q+ S SS S Y
Sbjct: 907 SSSSSSLSVYCVSNCLPHHRHCQCTVFPTVFIVIVSVLCFQL-------SSSSSSLSVYC 959
Query: 188 NSLRLPHHRLCQEPLPQAAV 247
S LP HR CQ+ +P V
Sbjct: 960 VSNCLPRHRHCQDAVPSLQV 979
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 184 LEQSSAPSSSAMPGTPPSSSSCS 252
L +SS P +S+ PG PPS + S
Sbjct: 678 LVKSSPPGNSSSPGIPPSGPANS 700
>SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -2
Query: 176 SGTSYSHCRCTSTNEFGSRVNV 111
+ T +HCRCT FG V
Sbjct: 1031 TNTRQTHCRCTHLTSFGGAFEV 1052
>SB_47160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1806
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 181 VLEQSSAPSSSAMPGTPPSSSSC---SQRHHKTEQTHSL 288
+L Q + P+S + G PP SS S+R H T S+
Sbjct: 400 ILRQENIPTSMYLEGHPPKSSDSGGQSRRSHHLSFTTSI 438
>SB_29029| Best HMM Match : C1_1 (HMM E-Value=1)
Length = 250
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 167 SYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRY 48
S S + T T +FG +VN+ LEG R+ D+ +
Sbjct: 20 SESTSQATFTKDFGCQVNICCASASLEGEIQRQRNTDTNF 59
>SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1726
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 190 QSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQ 294
QS PSSS + T PS+ SQ QT + Q
Sbjct: 1173 QSCKPSSSQINATEPSTHPVSQPGSSPSQTSTCSQ 1207
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 82 GPSRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSS 246
GPS+ RSL+ +T LP S + P + +++ S M +PP+S+S
Sbjct: 373 GPSKKSRSLQAVTSLPLSKRIAN-------PLQITMNTTSASVPVMTTSPPNSTS 420
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,733,058
Number of Sequences: 59808
Number of extensions: 224438
Number of successful extensions: 1202
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 377252670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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