Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0291
(306 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase su... 57 2e-09
D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase su... 57 2e-09
AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical... 57 2e-09
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 31 0.16
AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical ... 31 0.16
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 30 0.37
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 29 0.48
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 29 0.85
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 1.1
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 28 1.1
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 1.1
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 28 1.1
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 28 1.1
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 28 1.1
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 27 2.0
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 27 2.0
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 27 2.0
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 27 2.0
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 27 2.0
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 27 2.6
U23139-2|AAL02483.1| 460|Caenorhabditis elegans Hypothetical pr... 27 2.6
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 27 2.6
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical pr... 27 3.4
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 27 3.4
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 27 3.4
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 26 6.0
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 26 6.0
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 26 6.0
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 26 6.0
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 26 6.0
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 26 6.0
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 26 6.0
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 26 6.0
AF045635-1|AAU87830.1| 480|Caenorhabditis elegans Nuclear hormo... 26 6.0
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z48585-1|CAA88486.1| 154|Caenorhabditis elegans Hypothetical pr... 25 7.9
U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical pr... 25 7.9
U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 25 7.9
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 25 7.9
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 25 7.9
AF040651-2|AAB95015.1| 154|Caenorhabditis elegans Hypothetical ... 25 7.9
AC006772-2|AAF60609.2| 341|Caenorhabditis elegans Hypothetical ... 25 7.9
>D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 57.2 bits (132), Expect = 2e-09
Identities = 30/60 (50%), Positives = 33/60 (55%)
Frame = +3
Query: 75 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 254
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65
Score = 34.3 bits (75), Expect = 0.017
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1
Query: 306 LGFALSEAMGLFCLMM 259
LGFALSEAMGLFCL M
Sbjct: 69 LGFALSEAMGLFCLTM 84
>D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 57.2 bits (132), Expect = 2e-09
Identities = 30/60 (50%), Positives = 33/60 (55%)
Frame = +3
Query: 75 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 254
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65
Score = 34.3 bits (75), Expect = 0.017
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1
Query: 306 LGFALSEAMGLFCLMM 259
LGFALSEAMGLFCL M
Sbjct: 69 LGFALSEAMGLFCLTM 84
>AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical
protein Y82E9BR.3 protein.
Length = 116
Score = 57.2 bits (132), Expect = 2e-09
Identities = 30/60 (50%), Positives = 33/60 (55%)
Frame = +3
Query: 75 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 254
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 30 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 89
Score = 34.3 bits (75), Expect = 0.017
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1
Query: 306 LGFALSEAMGLFCLMM 259
LGFALSEAMGLFCL M
Sbjct: 93 LGFALSEAMGLFCLTM 108
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 31.1 bits (67), Expect = 0.16
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = -2
Query: 191 CSNTS-SGTSYSHCRCTSTN-EFGSRVNVLSDRCGLEGPHCR---ELCRDSRYHLCMGGY 27
CS+ + S SHC T + RV ++ C P CR +LC SRY M Y
Sbjct: 296 CSHPAFSEVMASHCSLTCGRCDEVERVEEGTEDCEDMTPDCRNYRDLCEHSRYKTLMENY 355
Query: 26 CCKWSHQC 3
C K C
Sbjct: 356 CPKACGHC 363
>AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical
protein Y57A10C.11 protein.
Length = 262
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Frame = +2
Query: 122 CCQIH--WCWCSDSGSSWF----RSWYWNSLRLPHHRLCQEPLPQAAVVLN 256
CC + W W D+ W+ R +YW+ + +P +C L +VLN
Sbjct: 55 CCLVGSGWMWVVDNKRKWYIRSIRRFYWHRILMPTAVVCLNILLPLVMVLN 105
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 29.9 bits (64), Expect = 0.37
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 181 VLEQSSAPSSSAMPGTPPSSSSCSQRHHKT 270
+L++S P +SA P PP++ S S +HH +
Sbjct: 352 MLQRSPPPCASAPPVAPPTAPSTSFQHHNS 381
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 29.5 bits (63), Expect = 0.48
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 79 CGPSRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCS 252
C + H RT+ N + +++ ++P+ L +SAPSSS + S+SSCS
Sbjct: 536 CCENVNHHGCRTIVAEDNDFSKLPEKYDHILPQKRLT-NSAPSSSDSQNSIRSASSCS 592
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 28.7 bits (61), Expect = 0.85
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 2 CTGATTCSSTHPYTDGTCCPYTALCSAVLP 91
C+ C + D CCPY + C A P
Sbjct: 189 CSATKPCPNGFSCNDKKCCPYASACPAGAP 218
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = -2
Query: 221 GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 45
G D+ + CS S G + S C C + + G GP C E CR RY
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591
Query: 44 LCMGGYCCKWSHQC 3
G C+ QC
Sbjct: 1592 ----GQSCQNKCQC 1601
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 94 PHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTE 273
PH RT T S V + + ++ + ++SSAP S + TP SS S + +
Sbjct: 93 PHTPTRTPTT--ESPVAPRTPGKVVISSVEKQESSAPDESTIAATPKKSSKKSPKEQNYD 150
Query: 274 QTHSLR 291
S+R
Sbjct: 151 DEVSVR 156
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = -2
Query: 221 GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYH 45
G D+ + CS S G + S C C + + G GP C E CR RY
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591
Query: 44 LCMGGYCCKWSHQC 3
G C+ QC
Sbjct: 1592 ----GQSCQNKCQC 1601
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 205 SSSAMPGTPPSSSSCSQRHHK 267
+S+A P PPSSSS S+R H+
Sbjct: 277 ASAAAPPPPPSSSSSSKRSHE 297
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 205 SSSAMPGTPPSSSSCSQRHHK 267
+S+A P PPSSSS S+R H+
Sbjct: 412 ASAAAPPPPPSSSSSSKRSHE 432
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 205 SSSAMPGTPPSSSSCSQRHHK 267
+S+A P PPSSSS S+R H+
Sbjct: 457 ASAAAPPPPPSSSSSSKRSHE 477
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 181 VLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQ 294
V+ + APS A P P S+S Q HH T+S R+
Sbjct: 545 VVNRQRAPSIQAPPLPPRLSASEHQPHHPYTNTNSERE 582
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 181 VLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQ 294
V+ + APS A P P S+S Q HH T+S R+
Sbjct: 545 VVNRQRAPSIQAPPLPPRLSASEHQPHHPYTNTNSERE 582
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 181 VLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQ 294
V+ + APS A P P S+S Q HH T+S R+
Sbjct: 528 VVNRQRAPSIQAPPLPPRLSASEHQPHHPYTNTNSERE 565
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 181 VLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQ 294
V+ + APS A P P S+S Q HH T+S R+
Sbjct: 486 VVNRQRAPSIQAPPLPPRLSASEHQPHHPYTNTNSERE 523
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -2
Query: 191 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELC 63
C NT TS S+C C + S + L P C++ C
Sbjct: 51 CHNTQQSTSASNCNCVLKSNSKSVPVTIKVSTKLCAPACQQSC 93
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 137 WCWCSDSGSSWFRSWYWNSLRLPHH 211
WC + S SSW + W + L HH
Sbjct: 19 WCNMNISQSSWIKCRDWMAFALSHH 43
>U23139-2|AAL02483.1| 460|Caenorhabditis elegans Hypothetical
protein F13H8.11 protein.
Length = 460
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 31 PPIHRWYLLSLHSSLQCGPSRPHRSLRTLTLLPNS 135
PP+ YL ++ +S C PSR R LR + +S
Sbjct: 368 PPVECPYLRTIQNSENCEPSREMRFLRVPSAFASS 402
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 137 WCWCSDSGSSWFRSWYWNSLRLPHH 211
WC + S SSW + W + L HH
Sbjct: 19 WCNMNISQSSWIKCRDWMAFALSHH 43
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 CTGATTCSSTHPYTDGTCC-PYTALCSAVLPDHIGH*GH*LCCQIHWCWCSDSGSS 166
C T+C + P++ G CC +C A G+ C + C G S
Sbjct: 797 CPSTTSCYAPTPFSSGLCCASIDEVCPATFIYEEEKSGNEQCSPLEKNTCGQDGQS 852
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 2 CTGATTCSSTHPYTDGTCCPYTA 70
C+G C TH + CCP A
Sbjct: 376 CSGKEHCPETHDCKNTVCCPKPA 398
>Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical
protein ZK643.6 protein.
Length = 180
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = -2
Query: 203 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLC----M 36
G ++C++ ++ SY+ RC S E+ S ++ L C C +C D+ +C
Sbjct: 103 GTQECTDLANDCSYNQNRC-SVKEYSSLMHRL---CPKTCNAC-NICEDAN-KMCPIWVP 156
Query: 35 GGYCCKWSH 9
G+C K+ H
Sbjct: 157 RGFCSKFDH 165
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 2 CTGATTCSSTHPYTDGTCCPYT 67
C+ T C+S + +G CCP T
Sbjct: 126 CSTNTQCASGYTCNNGACCPNT 147
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 35 PYTDGTCCPYTALC 76
P+T GTCCP T C
Sbjct: 52 PFTGGTCCPGTNHC 65
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 26.2 bits (55), Expect = 4.5
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 13/74 (17%)
Frame = -2
Query: 203 GAEDCSNTSSGTSYSHC-------RC----TSTNEFGSRVNVLSDRC--GLEGPHCRELC 63
G E C TSSG HC C S F + N +C G G +C +L
Sbjct: 1704 GDEICDCTSSGWLGDHCEIQPKLDNCLYCQNSVKCFDTFTNYSRCQCAPGFSGDYCSDLI 1763
Query: 62 RDSRYHLCMGGYCC 21
D + C G C
Sbjct: 1764 DDCFFEPCFNGGTC 1777
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 17 TCSSTHPYTDGTCCPYTALCSAVLPDHIG 103
+CS + + GTC Y A C A LP G
Sbjct: 1964 SCSDINCFNGGTCIDYNATC-ACLPGTTG 1991
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 172 PELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQ 276
P + +SS P SS + SSS HHK E+
Sbjct: 91 PSSMTPESSRPGSSLETPSSSSSSKHHHHHHKKER 125
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 25.8 bits (54), Expect = 6.0
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 130 NSLVLVQRQWE*LVPELVLE-QSSAPSSSAMPGTPPSS-SSCSQRHHKTEQTHSLRQ 294
+S+ L++R L ++ E QS S + + T SS SSC Q+H+++ + HS Q
Sbjct: 470 DSMTLLKRLSSNLSSRIIKEDQSPHQSMTDITITDTSSISSCPQQHNQSVRDHSSLQ 526
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 202 PSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQGETQ 306
P++ + G PP Q+HH +++QG Q
Sbjct: 1640 PTAPSNGGIPPQQQHQQQQHHGNGMNGNMQQGAPQ 1674
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 202 PSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQGETQ 306
P++ + G PP Q+HH +++QG Q
Sbjct: 1640 PTAPSNGGIPPQQQHQQQQHHGNGMNGNMQQGAPQ 1674
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 202 PSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQGETQ 306
P++ + G PP Q+HH +++QG Q
Sbjct: 270 PTAPSNGGIPPQQQHQQQQHHGNGMNGNMQQGAPQ 304
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 1090 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 1128
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 1124 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 1162
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 1061 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 1099
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 1195 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 1233
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 1090 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 1128
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 1124 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 1162
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 1061 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 1099
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 1195 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 1233
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 775 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 813
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 25.8 bits (54), Expect = 6.0
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 130 NSLVLVQRQWE*LVPELVLE-QSSAPSSSAMPGTPPSS-SSCSQRHHKTEQTHSLRQ 294
+S+ L++R L ++ E QS S + + T SS SSC Q+H+++ + HS Q
Sbjct: 470 DSMTLLKRLSSNLSSRIIKEDQSPHQSMTDITITDTSSISSCPQQHNQSVRDHSSLQ 526
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 187 EQSSAPSSSAMPGTPPSSSSCSQRHHK 267
E SS+ SSS+ + SSS + HHK
Sbjct: 250 ESSSSSSSSSSSSSSSSSSEDEKHHHK 276
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 VPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNV 111
+P I DDE D + +S+ S S R + N VNV
Sbjct: 1124 IPVIYDDEHVYDAACSSTSASQSSKRSSGCNSIKVTVNV 1162
>AF045635-1|AAU87830.1| 480|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 76 protein.
Length = 480
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 202 PSSSAMPGTPPSSSSCSQRHHKTE 273
PS + +PPS+SSCS K E
Sbjct: 54 PSPPSAISSPPSTSSCSSASEKKE 77
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical protein
R09H10.5 protein.
Length = 1603
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 194 DCSNTSSGTSYSHCRCTSTNEFGS 123
DC N+++ +Y C+C N FG+
Sbjct: 1546 DCMNSATVDTYGFCQC-DANHFGN 1568
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 44 LCMGGYCCKWSHQC 3
LC G CC WS C
Sbjct: 698 LCEGQSCCNWSEWC 711
>Z48585-1|CAA88486.1| 154|Caenorhabditis elegans Hypothetical
protein ZK673.1 protein.
Length = 154
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 5 TGATTCSSTHPYTDGTCCPYTALCS 79
+GATT S+ + C YT+LCS
Sbjct: 59 SGATTASTCADDPNTDCTQYTSLCS 83
>U41011-4|AAA82287.1| 294|Caenorhabditis elegans Hypothetical
protein D2024.4 protein.
Length = 294
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 209 DEGAEDCSNTSSGTSYSHCRCTSTNE 132
+EG E+CS T + Y+ CT T +
Sbjct: 137 NEGKEECSTTDNIHRYTFKMCTPTQD 162
>U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical
protein C05D10.4c protein.
Length = 418
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 203 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSD 102
G+ + S TSS S S TST EF + + V D
Sbjct: 113 GSTEVSITSSSPSPSSSSSTSTGEFKTTITVDDD 146
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 203 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSD 102
G+ + S TSS S S TST EF + + V D
Sbjct: 292 GSTEVSITSSSPSPSSSSSTSTGEFKTTITVDDD 325
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 203 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSD 102
G+ + S TSS S S TST EF + + V D
Sbjct: 260 GSTEVSITSSSPSPSSSSSTSTGEFKTTITVDDD 293
>AF040651-2|AAB95015.1| 154|Caenorhabditis elegans Hypothetical
protein W04H10.2 protein.
Length = 154
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 283 YGSVLSYDGVENNCCLR 233
YG+ + DG+ENN CL+
Sbjct: 47 YGNSCTGDGLENNTCLK 63
>AC006772-2|AAF60609.2| 341|Caenorhabditis elegans Hypothetical
protein Y46D2A.1 protein.
Length = 341
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSL 288
S+ P SS + S S++ TEQTHSL
Sbjct: 229 SAFPESSTINFVYKDDQSSSRQSFSTEQTHSL 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,586,616
Number of Sequences: 27780
Number of extensions: 150238
Number of successful extensions: 916
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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