Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0291
(306 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 0.37
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 0.48
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 0.64
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 0.84
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 2.0
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 2.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 2.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 20 6.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 20 6.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 20 6.0
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 20 7.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 7.9
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 7.9
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 7.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 7.9
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.2 bits (50), Expect = 0.37
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = +1
Query: 67 SSLQCGPSRPHRSLRTLTLLPNS----LVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPP 234
+SL +PH+ R L ++ V+VQ L L + +PSS A P
Sbjct: 634 NSLMDEAYKPHKKFRALRQKDSAEAEPAVIVQHTQSQLHLHLTSPPARSPSSQAQASQCP 693
Query: 235 SSSSCSQRHHKTEQTHSLRQG 297
++S H T SL +G
Sbjct: 694 QTASLLSSTHST-LARSLMEG 713
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 0.48
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 178 LVLEQSSAPSSSAMPGTPPSSS 243
+VL S P A P PPSSS
Sbjct: 330 IVLGDSDTPPKPAPPPPPPSSS 351
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.4 bits (48), Expect = 0.64
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 166 LVPELVLEQSSAPSSSAMPGTPPSSSSCS 252
++ E V+E +S+PS + + PSSS+ S
Sbjct: 499 VIHEPVVETNSSPSPNPRIASAPSSSTSS 527
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.0 bits (47), Expect = 0.84
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 187 EQSSAPSSSAMPGTPPSSSSCSQRH 261
+QS A S + PG P +Q+H
Sbjct: 208 QQSQAASQQSQPGMHPRQQQQAQQH 232
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 2.0
Identities = 9/34 (26%), Positives = 12/34 (35%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQ 294
S P PG PPS + H ++Q
Sbjct: 43 SQGPPPGGPPGAPPSQNPSQMMISPASGIHQMQQ 76
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.4 bits (43), Expect = 2.6
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 52 LLSLHSSLQCGPSRPHRSLRTLTLLPNS 135
+L ++ L C + +S+R +T LP++
Sbjct: 208 MLGIYCRLYCYAQKHVKSIRAVTKLPDT 235
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 2.6
Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +1
Query: 22 QQYP-PIHRWY 51
Q +P P+HRWY
Sbjct: 237 QGFPVPVHRWY 247
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 6.0
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 205 SSSAMPGTPPSSSSCSQ 255
S S PG P S C Q
Sbjct: 531 SGSCAPGAPLDSKLCQQ 547
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 6.0
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 205 SSSAMPGTPPSSSSCSQ 255
S S PG P S C Q
Sbjct: 531 SGSCAPGAPLDSKLCQQ 547
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 6.0
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 205 SSSAMPGTPPSSSSCSQ 255
S S PG P S C Q
Sbjct: 531 SGSCAPGAPLDSKLCQQ 547
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 19.8 bits (39), Expect = 7.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 173 RSWYWNSLRLPHHRLCQEPLPQA 241
R Y + R PH RL +E P+A
Sbjct: 101 RPVYISQPRPPHPRLRREAEPEA 123
Score = 19.8 bits (39), Expect = 7.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 173 RSWYWNSLRLPHHRLCQEPLPQA 241
R Y + R PH RL +E P+A
Sbjct: 157 RPVYISQPRPPHPRLRREAEPEA 179
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 136 MNLAAESMSLVTDVV 92
+NL AESM +D V
Sbjct: 240 LNLVAESMPTTSDAV 254
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 136 MNLAAESMSLVTDVV 92
+NL AESM +D V
Sbjct: 240 LNLVAESMPTTSDAV 254
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 136 MNLAAESMSLVTDVV 92
+NL AESM +D V
Sbjct: 240 LNLVAESMPTTSDAV 254
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 7.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 136 MNLAAESMSLVTDVV 92
+NL AESM +D V
Sbjct: 308 LNLVAESMPTTSDAV 322
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.8 bits (39), Expect = 7.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 146 CSDSGSSW 169
C+DSGS W
Sbjct: 318 CADSGSIW 325
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 196 SAPSSSAMPGTPPSSSSCSQRHH 264
S S PGTP + + +RHH
Sbjct: 134 SLSSPPREPGTPRINFTKLKRHH 156
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 19.8 bits (39), Expect = 7.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 280 GSVLSYDGVENNC 242
GS+ + DG E++C
Sbjct: 191 GSISNIDGAEDHC 203
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,928
Number of Sequences: 438
Number of extensions: 1681
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6493812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -