Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0291
(306 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g26360.1 68414.m03216 hydrolase, alpha/beta fold family prote... 29 0.62
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 28 1.1
At1g69550.1 68414.m07998 disease resistance protein (TIR-NBS cla... 28 1.1
At1g21910.1 68414.m02742 AP2 domain-containing transcription fac... 28 1.1
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 28 1.4
At1g17960.1 68414.m02222 threonyl-tRNA synthetase, putative / th... 28 1.4
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 27 1.9
At5g11040.1 68418.m01290 expressed protein weak similarity to hy... 27 2.5
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 2.5
At3g48380.2 68416.m05281 expressed protein 27 2.5
At3g48380.1 68416.m05280 expressed protein 27 2.5
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 27 2.5
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 27 2.5
At5g21120.1 68418.m02518 ethylene-insensitive3-like2 (EIL2) iden... 27 3.3
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 27 3.3
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 27 3.3
At2g07671.1 68415.m00894 H+-transporting two-sector ATPase, C su... 27 3.3
At1g56080.1 68414.m06439 expressed protein 27 3.3
At5g67370.1 68418.m08495 expressed protein similar to unknown pr... 26 4.3
At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative / L-id... 26 4.3
At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative / L-id... 26 4.3
At3g08670.1 68416.m01007 expressed protein 26 4.3
At3g02420.1 68416.m00229 expressed protein 26 4.3
At1g29940.1 68414.m03658 DNA-directed RNA polymerase family prot... 26 4.3
At5g64290.1 68418.m08076 oxoglutarate/malate translocator, putat... 26 5.7
At4g26520.1 68417.m03820 fructose-bisphosphate aldolase, cytopla... 26 5.7
At4g24690.1 68417.m03534 ubiquitin-associated (UBA)/TS-N domain-... 26 5.7
At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein co... 26 5.7
At3g16160.1 68416.m02040 tesmin/TSO1-like CXC domain-containing ... 26 5.7
At2g03470.2 68415.m00306 myb family transcription factor / ELM2 ... 26 5.7
At2g03470.1 68415.m00305 myb family transcription factor / ELM2 ... 26 5.7
At5g38740.1 68418.m04685 MADS-box family protein contains simila... 25 7.6
At5g36860.1 68418.m04416 Ulp1 protease family protein contains P... 25 7.6
At5g22000.3 68418.m02560 zinc finger (C3HC4-type RING finger) fa... 25 7.6
At5g22000.2 68418.m02559 zinc finger (C3HC4-type RING finger) fa... 25 7.6
At5g22000.1 68418.m02558 zinc finger (C3HC4-type RING finger) fa... 25 7.6
At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/PO... 25 7.6
At4g31090.1 68417.m04413 expressed protein 25 7.6
At4g15850.1 68417.m02410 DEAD/DEAH box helicase, putative simila... 25 7.6
At4g15475.1 68417.m02365 F-box family protein (FBL4) 99.7% ident... 25 7.6
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 25 7.6
At3g55605.1 68416.m06176 mitochondrial glycoprotein family prote... 25 7.6
At1g63910.1 68414.m07236 myb family transcription factor (MYB103... 25 7.6
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 25 7.6
At1g12500.1 68414.m01447 phosphate translocator-related low simi... 25 7.6
>At1g26360.1 68414.m03216 hydrolase, alpha/beta fold family protein
similar to SP|Q40708 PIR7A protein {Oryza sativa},
ethylene-induced esterase [Citrus sinensis] GI:14279437,
polyneuridine aldehyde esterase [Rauvolfia serpentina]
GI:6651393; contains Pfam profile PF00561: alpha/beta
hydrolase fold
Length = 444
Score = 29.1 bits (62), Expect = 0.62
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +1
Query: 88 SRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSSSCSQRHHK 267
S ++ +R L+L+P+ +R+ L+P L SS+ SSS G + +RHH
Sbjct: 27 SGKYKYVRRLSLMPS----FRRRT--LLPSLSCSGSSSTSSSKKGGIKAKTKKIRERHHH 80
Query: 268 TEQTH 282
Q H
Sbjct: 81 HHQDH 85
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 184 LEQSSAPSSSAMPGTPPSSSSCSQRH 261
L SS+PSS + PP SSSC H
Sbjct: 37 LSPSSSPSSLSPSSVPPPSSSCIWTH 62
>At1g69550.1 68414.m07998 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 703
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 172 PELVLEQSSAPSSSAMPGTPPSSSSCSQRHH 264
P + +S PSSS +PPSS SC+ HH
Sbjct: 54 PSTLSSSTSHPSSST---SPPSSLSCTGTHH 81
>At1g21910.1 68414.m02742 AP2 domain-containing transcription factor
family protein similar to TINY GB:CAA64359 GI:1246403
from [Arabidopsis thaliana]
Length = 230
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQRHHKTE 273
SS+PSSS+ + SSSSC ++ K++
Sbjct: 20 SSSPSSSSSSSSSSSSSSCKNKNKKSK 46
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -3
Query: 133 NLAAESMSLVTDVVWKDRTAESCVGTAGTICVWVGTAASGRTS 5
N+A+E + L+ ++ CV +C+ VG ++SG+TS
Sbjct: 2028 NIASEQLKLLPEIRQNLEAVAHCVQNKW-LCILVGPSSSGKTS 2069
>At1g17960.1 68414.m02222 threonyl-tRNA synthetase, putative /
threonine--tRNA ligase, putative similar to SP|O04630
Threonyl-tRNA synthetase, mitochondrial precursor (EC
6.1.1.3) (Threonine--tRNA ligase) (ThrRS) {Arabidopsis
thaliana}; contains Pfam profiles PF00587: tRNA
synthetase class II core domain (G, H, P, S and T),
PF03129: Anticodon binding domain, PF02824: TGS domain
Length = 458
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 88 SRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAM 219
SRPH ++ +TLLP+ + R+WE ++ ++ S + SA+
Sbjct: 37 SRPHDPIK-ITLLPDGIEKEGRRWETSPMDIAVQISKGLAKSAL 79
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 221 GIADDEGAEDCSNTSSGTSYSHCRCTSTNEFG 126
GI DD+G ++ + S + R T+EFG
Sbjct: 660 GIVDDDGGKESKDKESKDRFKDIRIERTDEFG 691
>At5g11040.1 68418.m01290 expressed protein weak similarity to
hypercellular protein [Aspergillus nidulans] GI:9309269
Length = 1186
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 116 NVLSDRCGLEGPHCRELCRDSRYHLCMGG 30
NVL R G P+ CR +H+C+ G
Sbjct: 1155 NVLRARAGTASPNEPIFCRGPPFHVCVAG 1183
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 212 DDEGAEDCSNTSSGTSYS-HCRCTSTNEFGSRVNVLSD 102
DDE ++D + SS T YS C + ++ G+ ++ D
Sbjct: 1108 DDESSDDDDDLSSETDYSDECEDSDDSDLGNEIDYSED 1145
>At3g48380.2 68416.m05281 expressed protein
Length = 640
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 164 SWFRSWYWNSLRLPHHRLCQEPL 232
SWFR ++ S+ +P HR Q+ L
Sbjct: 477 SWFRLQHYTSISVPSHREIQQTL 499
>At3g48380.1 68416.m05280 expressed protein
Length = 645
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 164 SWFRSWYWNSLRLPHHRLCQEPL 232
SWFR ++ S+ +P HR Q+ L
Sbjct: 482 SWFRLQHYTSISVPSHREIQQTL 504
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 184 LEQSSAPSSSAMPGTPPSSSSCSQRH 261
++++ +SS+ P +P SS SC+Q+H
Sbjct: 31 VQETIITTSSSPPTSPQSSLSCNQKH 56
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 175 ELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQGET 303
E+V S PS+SA +S+S K+E+T+ G+T
Sbjct: 679 EMVDNPSGLPSTSAQDEARDASASTEANGSKSEETYEPSDGDT 721
>At5g21120.1 68418.m02518 ethylene-insensitive3-like2 (EIL2)
identical to ethylene-insensitive3-like2 (EIL2)
GI:2224929 from [Arabidopsis thaliana]
Length = 518
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 20 CSSTHPYTDGTCC--PYTALCSAVLPD 94
CSS P+T+G C +TALC + D
Sbjct: 16 CSSAPPFTEGHMCSDSHTALCDDLSSD 42
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 248 QLLLEGGV-PGIADDEGAEDCSNTSSGTS 165
+LL+E GV PGI D+G D + T+ T+
Sbjct: 91 ELLMENGVIPGIKVDKGVVDLAGTNGETT 119
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 26.6 bits (56), Expect = 3.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 107 SDRCGLEGPHCRELCRDSRY 48
+D+CG + P CR+L + RY
Sbjct: 752 ADKCGRKCPKCRQLIGNGRY 771
>At2g07671.1 68415.m00894 H+-transporting two-sector ATPase, C
subunit family protein similar to ATPase subunit 9
[Arabidopsis thaliana] GI:15215920; contains Pfam
profile PF00137: ATP synthase subunit C
Length = 85
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 306 LGFALSEAMGLFCLMMA 256
LGFAL+EA+ LF MMA
Sbjct: 62 LGFALTEAIALFAPMMA 78
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 195 FGSLIIGYARNPSLKQQLF 251
F SLI ARNPSL +Q F
Sbjct: 39 FSSLIHSVARNPSLAKQSF 57
>At1g56080.1 68414.m06439 expressed protein
Length = 310
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQGETQ 306
SS S++ +PP S S S RH + + RQ ++
Sbjct: 220 SSTSQQSSVANSPPRSHSVSARHPRIDGKEFFRQARSR 257
>At5g67370.1 68418.m08495 expressed protein similar to unknown
protein (gb|AAC18972.1)
Length = 327
Score = 26.2 bits (55), Expect = 4.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 65 CRDSRYHLCMGGYCCKW 15
CRD Y GG CKW
Sbjct: 306 CRDRYYRALAGGQYCKW 322
>At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = -2
Query: 134 EFGSRVN--VLSDRCGLE-GPHCRE--LCRDSRYHLC 39
E G V V+ DR LE G C LCR+ RY+LC
Sbjct: 87 EVGEEVKHLVVGDRVALEPGISCWRCNLCREGRYNLC 123
>At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = -2
Query: 134 EFGSRVN--VLSDRCGLE-GPHCRE--LCRDSRYHLC 39
E G V V+ DR LE G C LCR+ RY+LC
Sbjct: 87 EVGEEVKHLVVGDRVALEPGISCWRCNLCREGRYNLC 123
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 172 PELVLEQSSAPSSSAM-PGTPPSSSSCSQRHHKTEQTHSLRQGET 303
P +L SSA SS + P +P S SS S R +T S + T
Sbjct: 176 PSSILNTSSASVSSYIRPSSPSSRSSSSARPSTPTRTSSASRSST 220
>At3g02420.1 68416.m00229 expressed protein
Length = 348
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 172 PELVLEQSSAPSSSAMPGTP-PSSSSCSQRHHKTEQTHSLRQG 297
P+LV+E S SSS+ P +S+S + + EQ S G
Sbjct: 61 PDLVVEPMSTSSSSSQSARPTATSASSTASSNANEQVRSRNSG 103
>At1g29940.1 68414.m03658 DNA-directed RNA polymerase family protein
similar to SP|P22138 DNA-directed RNA polymerase I 135
kDa polypeptide (EC 2.7.7.6) (RNA polymerase I subunit
2) {Saccharomyces cerevisiae}; contains Pfam profiles
PF04563; RNA polymerase beta subunit, PF04560: RNA
polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2
domain 2, PF04565: RNA polymerase Rpb2 domain 3,
PF00562: RNA polymerase Rpb2 domain 6
Length = 1114
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 134 EFGS-RVNVLSDRCGLEGPHCRELCRDSRYHLCMGGY 27
+FG + ++S C L+G CR+L + MGGY
Sbjct: 70 DFGQFPIMLMSKLCSLKGADCRKLLKCKESTSEMGGY 106
>At5g64290.1 68418.m08076 oxoglutarate/malate translocator, putative
similar to SWISS-PROT:Q41364 2-oxoglutarate/malate
translocator, chloroplast precursor. [Spinach]{Spinacia
oleracea}
Length = 563
Score = 25.8 bits (54), Expect = 5.7
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 103 SLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPPSSS 243
SLR+L++ P S L++ +P ++AP +A P PPS S
Sbjct: 45 SLRSLSVQPLSFPLLKP-----IPRFSTRIAAAPQDNAPPPPPPSPS 86
>At4g26520.1 68417.m03820 fructose-bisphosphate aldolase,
cytoplasmic identical to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 25.8 bits (54), Expect = 5.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = -2
Query: 245 LLLEGGV-PGIADDEGAEDCSNTSSGTSYS-----HCRCTSTNEFGSR 120
LL+E GV PGI D+G D + T+ T+ RC E G+R
Sbjct: 92 LLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGAR 139
>At4g24690.1 68417.m03534 ubiquitin-associated (UBA)/TS-N
domain-containing protein / octicosapeptide/Phox/Bemp1
(PB1) domain-containing protein contains Pfam profiles
PF00627: Ubiquitin-associated (UBA)/TS-N domain,
PF00569: Zinc finger ZZ type domain, PF00564: PB1 domain
Length = 704
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 94 VWKDRTAESCVGTAGTICVWVG 29
+WK R + S V GT VW+G
Sbjct: 401 IWKMRNSGSLVWPQGTQIVWIG 422
>At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein
contains similarity to hydantoin utilization protein C
[Pseudomonas sp.] SWISS-PROT:Q01264; contains Pfam
profile PF01546: Peptidase family M20/M25/M40
Length = 525
Score = 25.8 bits (54), Expect = 5.7
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 166 LVPELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQT-HSLRQ 294
L+ L L SS+ SSS+ + SSS S +TE T H L Q
Sbjct: 46 LLSPLALSSSSSSSSSSSDSSSSSSSHISLGIGETEGTKHDLHQ 89
>At3g16160.1 68416.m02040 tesmin/TSO1-like CXC domain-containing
protein low similarity to cysteine-rich polycomb-like
protein (cpp1) [Glycine max] GI:4218187; contains Pfam
profile PF03638: Tesmin/TSO1-like CXC domain
Length = 360
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 58 SLHSSLQCGPSRPHRSLR--TLTLLPN 132
+L S + C P P+RSL T TLLP+
Sbjct: 225 ALGSPMSCSPKLPYRSLMGYTSTLLPD 251
>At2g03470.2 68415.m00306 myb family transcription factor / ELM2
domain-containing protein contains Pfam profile: PF00249
Myb-like DNA-binding domain; contains Pfam profile:
PF01448 ELM2 domain
Length = 449
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -2
Query: 212 DDEGAEDCSNTSSGTSYSHCRCT---STNEFGSRVNVLSDRC 96
DDE E+ ++SS + HC T S + FG VNV D C
Sbjct: 335 DDEEEEEEDDSSSNDA--HCVDTDKASRDGFGEEVNVEDDSC 374
>At2g03470.1 68415.m00305 myb family transcription factor / ELM2
domain-containing protein contains Pfam profile: PF00249
Myb-like DNA-binding domain; contains Pfam profile:
PF01448 ELM2 domain
Length = 450
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -2
Query: 212 DDEGAEDCSNTSSGTSYSHCRCT---STNEFGSRVNVLSDRC 96
DDE E+ ++SS + HC T S + FG VNV D C
Sbjct: 336 DDEEEEEEDDSSSNDA--HCVDTDKASRDGFGEEVNVEDDSC 375
>At5g38740.1 68418.m04685 MADS-box family protein contains
similarity to hypothetical proteins of [Arabidopsis
thaliana]
Length = 426
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 218 IADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGL 90
I + CSN+SS +SYS + +N + S+ C L
Sbjct: 4 IRSSPSSSRCSNSSSSSSYSLASTSLSNRLETIFKKASELCTL 46
>At5g36860.1 68418.m04416 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1204
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 175 ELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQGET 303
E+V S PS+SA +S+S ++E+T+ G+T
Sbjct: 742 EMVDNPSGLPSTSAQEEARDASASTEANGSESEETYEPSDGDT 784
>At5g22000.3 68418.m02560 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 375
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQR 258
SS P++S+ P PP SS SQR
Sbjct: 172 SSQPNASSPPPHPPMPSSPSQR 193
>At5g22000.2 68418.m02559 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 375
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQR 258
SS P++S+ P PP SS SQR
Sbjct: 172 SSQPNASSPPPHPPMPSSPSQR 193
>At5g22000.1 68418.m02558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 375
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQR 258
SS P++S+ P PP SS SQR
Sbjct: 172 SSQPNASSPPPHPPMPSSPSQR 193
>At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger;
similar to Speckle-type POZ protein (SP:O43791) [Homo
sapiens]
Length = 368
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 185 WNSLRLPHHRLCQEPLPQAAVVLNAIIRQNR 277
W +++ H RL +E L A LN++ ++NR
Sbjct: 197 WQAMKESHPRLQKELLRSVAYELNSLKQRNR 227
>At4g31090.1 68417.m04413 expressed protein
Length = 250
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +1
Query: 175 ELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTH 282
++ + QS + P T P S + HH +++H
Sbjct: 68 DMEVNQSRGLRNRRQPNTRPHGSGSTSTHHSDDESH 103
>At4g15850.1 68417.m02410 DEAD/DEAH box helicase, putative similar
to D-E-A-D box protein [Drosophila melanogaster]
GI:499204; contains Pfam profiles PF00270: DEAD/DEAH box
helicase, PF00271: Helicase conserved C-terminal domain
Length = 512
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 88 SRPHRSLRTLTLLP-NSLVL-VQRQWE*LVPELVLEQSSAPSSSAMPG 225
SRP R LR L +LP L L V+ ++ + P + L SA S++ G
Sbjct: 89 SRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAG 136
>At4g15475.1 68417.m02365 F-box family protein (FBL4) 99.7%
identical to F-box protein family, AtFBL4 (GP:21536497)
[Arabidopsis thaliana]; similar to grr1 GI:2407790 from
[Glycine max]
Length = 610
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 193 SSAPSSSAMPGTPPSSSSCSQRHHKTEQTHS 285
S +PS G SS S S+R T++THS
Sbjct: 87 SLSPSPKRKRGRDSSSPSSSKRKKLTDKTHS 117
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 175 ELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQGET 303
E+V S PS+SA +S+S ++E+T+ G+T
Sbjct: 606 EMVDNPSGLPSTSAQEEARDASASTEANGSESEETYEPSDGDT 648
>At3g55605.1 68416.m06176 mitochondrial glycoprotein family protein
/ MAM33 family protein low similarity to SUAPRGA1
[Emericella nidulans] GI:6562379; contains Pfam profile
PF02330: Mitochondrial glycoprotein
Length = 258
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 251 EQLLLEGGVPGIADDEGAEDCSNTSSG 171
EQ+ +E +PG+A DE +D + G
Sbjct: 117 EQIKVEVSMPGLAMDENEDDVDDDEDG 143
>At1g63910.1 68414.m07236 myb family transcription factor (MYB103)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 370
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 164 SWFRSWYWNSLRLPHHRLCQEPLPQAAVVLNA 259
+++ SW +R PHH + V LNA
Sbjct: 106 NYWNSWIKKKIRKPHHHYSRHQPSVTTVTLNA 137
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 175 ELVLEQSSAPSSSAMPGTPPSSSSCSQRHHKTEQTHSLRQGET 303
E+V S PS+SA +S+S ++E+T+ G+T
Sbjct: 709 EMVDNPSGLPSTSAQEEARDASASTEANGSESEETYEPSDGDT 751
>At1g12500.1 68414.m01447 phosphate translocator-related low
similarity to glucose-6-phosphate/phosphate-translocator
precursor [Zea mays] GI:2997589,
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275,
SP|P21727|CPTR_PEA Triose phosphate/phosphate
translocator, chloroplast precursor (CTPT) {Pisum
sativum}
Length = 361
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 172 PELVLEQSSAPSSSAMPGTPPSSSSCS 252
P ++AP+ +PGTPP SS+ S
Sbjct: 15 PRFDAAATAAPTIVDIPGTPPHSSASS 41
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,268,968
Number of Sequences: 28952
Number of extensions: 141442
Number of successful extensions: 714
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 311361520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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