Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0289
         (635 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    48   2e-04
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    45   0.002
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    37   0.47 
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   1.1  
UniRef50_P22814 Cluster: Segmentation protein Runt; n=25; Dipter...    36   1.1  
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   2.5  
UniRef50_Q318W0 Cluster: Putative DnaK-type molecular chaperone;...    33   5.8  

>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = +1

Query: 151 GKCFR*CSSCDDPRISPLTSQYECPQLSLL---IITSDSENQQNRTEIIFYYS 300
           GKCFR C S ++ RISPLTS+Y+CPQ + +   +I       Q  TE+ F+ S
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQATPINWPVIKRTPSRIQTMTEVTFFPS 311


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 25/47 (53%), Positives = 26/47 (55%)
 Frame = -2

Query: 142 FHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKPKIL 2
           F   RTKVRGSK IRYRPSSN K       +   M   A  GKPK L
Sbjct: 6   FRCQRTKVRGSKTIRYRPSSNHKRCRLGIRECYWMTSLAPYGKPKFL 52


>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 36.7 bits (81), Expect = 0.47
 Identities = 21/47 (44%), Positives = 24/47 (51%)
 Frame = +1

Query: 493 GTDSAGTNATTSFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKV 633
           G  +   + TTSFLTA  L+Y            RLALQ  LVK FKV
Sbjct: 31  GPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKV 77


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = -2

Query: 142 FHQSRTKVRGSKAIRYRPSSNRK 74
           FH  RTKV GSK IRY PS N K
Sbjct: 6   FHCQRTKVGGSKMIRYHPSLNHK 28


>UniRef50_P22814 Cluster: Segmentation protein Runt; n=25;
           Diptera|Rep: Segmentation protein Runt - Drosophila
           melanogaster (Fruit fly)
          Length = 510

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 26/85 (30%), Positives = 42/85 (49%)
 Frame = +2

Query: 44  SNVGGSLDDIFTVRTRAVSNRLRTSNFRS*LMKTPLANAFADVRLATIQEFHL*RRNTNA 223
           S+ G S  D+ T  T + SN   TS   S  M + + + FA +    +QE+H     T +
Sbjct: 66  SSTGSSTPDLSTNNTSSSSNAT-TSPQNSAKMPSSMTDMFASLH-EMLQEYHGELAQTGS 123

Query: 224 PSYPY*SLPRILKTNKIEPRSYSII 298
           PS    +LP   ++NK  P ++ +I
Sbjct: 124 PSILCSALPNHWRSNKSLPGAFKVI 148


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +3

Query: 564 SWNYRGCWHQTCP 602
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_Q318W0 Cluster: Putative DnaK-type molecular chaperone;
           n=5; Prochlorococcus marinus|Rep: Putative DnaK-type
           molecular chaperone - Prochlorococcus marinus (strain
           MIT 9312)
          Length = 522

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +1

Query: 364 NCRPTSTLTEEHRDRILILNRRFLERRLTDDMLRKRV-SITADAGTDSAGTNATTSFLTA 540
           N  PT  LTE H+++   L+R   E+ + ++ L   + S+  D   ++ G   T   L+A
Sbjct: 274 NKYPTKLLTEGHQEKEFFLSRETFEKIIIENNLLNHLNSLLKDLLNEARGKYCTVDDLSA 333

Query: 541 TILV 552
            ILV
Sbjct: 334 IILV 337


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,195,512
Number of Sequences: 1657284
Number of extensions: 11284019
Number of successful extensions: 27417
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27408
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)