Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0289
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   4.6  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   4.6  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   8.1  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +3

Query: 423 PAFFRTPAHRRYAPQTCQYHRGCGHRQRGHKCNYELFNRNNFSIRYWSWNYRG 581
           PA  R+     Y P  C+ ++  G+   G  C + L +R+++    W     G
Sbjct: 165 PANIRSTVRWDYQPDICKDYKETGYCGFGDSCKF-LHDRSDYK-HGWQMEQEG 215


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +3

Query: 423 PAFFRTPAHRRYAPQTCQYHRGCGHRQRGHKCNYELFNRNNFSIRYWSWNYRG 581
           PA  R+     Y P  C+ ++  G+   G  C + L +R+++    W     G
Sbjct: 165 PANIRSTVRWDYQPDICKDYKETGYCGFGDSCKF-LHDRSDYK-HGWQMEQEG 215


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 192 SWIVARRTSAKAFAKGVFINQERKLEVRR 106
           +W++  RT      KG    Q +KLE R+
Sbjct: 23  TWVMVYRTEKYQKLKGEVEKQSKKLEKRK 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,739
Number of Sequences: 2352
Number of extensions: 12041
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)