Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0263
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-P...    36   0.027
AE013599-2754|ABC66050.1|  119|Drosophila melanogaster CG33998-P...    33   0.25 
AY051864-1|AAK93288.1| 1304|Drosophila melanogaster LD36006p pro...    31   1.3  
AE014297-267|AAF52014.2| 1304|Drosophila melanogaster CG2519-PA,...    31   1.3  
AE014297-266|AAS65097.1| 1280|Drosophila melanogaster CG2519-PB,...    31   1.3  
AY119095-1|AAM50955.1|  371|Drosophila melanogaster LP12178p pro...    28   7.2  

>AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-PA
           protein.
          Length = 122

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = -1

Query: 317 GSGTTTDYGYYSP*PRPLGC*ASITAGGIGFSYANIKLKSPRGSGLNYQLEIY 159
           G+  T  Y   +   +  G  A IT+GG+G +   IK  S RG+G+  Q+ IY
Sbjct: 67  GTAKTITYIKITDLKKMRGATAEITSGGVGSTTVTIKFTSARGAGIKSQVVIY 119


>AE013599-2754|ABC66050.1|  119|Drosophila melanogaster CG33998-PA
           protein.
          Length = 119

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 254 ASITAGGIGFSYANIKLKSPRGSGLNYQLEIY 159
           A +TAGG   +YA I LKS R  G ++ ++IY
Sbjct: 86  AYLTAGGPQTTYAKIHLKSQRNQGFSFIIDIY 117


>AY051864-1|AAK93288.1| 1304|Drosophila melanogaster LD36006p
           protein.
          Length = 1304

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -2

Query: 460 FIFLSLVCVIQCKDLIVGT-SFNKRLLWQ---EKAEYNAIPLKKRVKEVFFSDPGQQLIM 293
           F+   LVC  + +D + G  S+ +++L +   EK ++N+  + + V  +F +  GQ++ +
Sbjct: 266 FLIAELVCRPEYEDCLHGLCSYVRKMLRRATMEKFDFNSCEVSQPVPYLFLTPKGQEIDL 325

Query: 292 GIIARDL 272
            +  RD+
Sbjct: 326 RLFCRDI 332


>AE014297-267|AAF52014.2| 1304|Drosophila melanogaster CG2519-PA,
           isoform A protein.
          Length = 1304

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -2

Query: 460 FIFLSLVCVIQCKDLIVGT-SFNKRLLWQ---EKAEYNAIPLKKRVKEVFFSDPGQQLIM 293
           F+   LVC  + +D + G  S+ +++L +   EK ++N+  + + V  +F +  GQ++ +
Sbjct: 266 FLIAELVCRPEYEDCLHGLCSYVRKMLRRATMEKFDFNSCEVSQPVPYLFLTPKGQEIDL 325

Query: 292 GIIARDL 272
            +  RD+
Sbjct: 326 RLFCRDI 332


>AE014297-266|AAS65097.1| 1280|Drosophila melanogaster CG2519-PB,
           isoform B protein.
          Length = 1280

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -2

Query: 460 FIFLSLVCVIQCKDLIVGT-SFNKRLLWQ---EKAEYNAIPLKKRVKEVFFSDPGQQLIM 293
           F+   LVC  + +D + G  S+ +++L +   EK ++N+  + + V  +F +  GQ++ +
Sbjct: 242 FLIAELVCRPEYEDCLHGLCSYVRKMLRRATMEKFDFNSCEVSQPVPYLFLTPKGQEIDL 301

Query: 292 GIIARDL 272
            +  RD+
Sbjct: 302 RLFCRDI 308


>AY119095-1|AAM50955.1|  371|Drosophila melanogaster LP12178p
           protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 24/80 (30%), Positives = 35/80 (43%)
 Frame = +3

Query: 234 ASCSNTCSASEWSRSRAIIPIISCCPGSEKNTSLTRFLSGMALYSAFSCHRSLLLKLVPT 413
           A  +NT     ++RS  I+   S   GS     +    SG  L    SC  +L+      
Sbjct: 109 APVNNTSCGEVYTRSNRIVGGHSTGFGSHP-WQVALIKSGF-LTRKLSCGGALISNRW-V 165

Query: 414 IRSLHCITQTKDKNMKIKTG 473
           I + HC+  T + NMKI+ G
Sbjct: 166 ITAAHCVASTPNSNMKIRLG 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,681,457
Number of Sequences: 53049
Number of extensions: 474689
Number of successful extensions: 982
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)