Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0258
(338 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1157 - 31333870-31334220,31334440-31334590,31334678-313349... 33 0.076
09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287... 32 0.13
04_04_1349 - 32811733-32813040 28 1.6
01_01_0117 + 864966-865686,866860-866883,867006-868063 28 1.6
01_01_0108 + 793499-794413 28 1.6
01_01_0098 + 744582-745380,746107-746130,746500-747569 28 1.6
08_01_0682 + 5974622-5974745,5976182-5976371,5976953-5977024,597... 28 2.1
01_01_0102 + 769442-770159,770710-770805,771340-771363,771470-77... 28 2.1
07_03_0626 + 20060013-20060273,20061017-20061274 27 2.8
06_03_1200 - 28352647-28352712,28353097-28353216,28353314-283534... 27 2.8
04_04_1156 - 31319747-31320085,31320556-31320706,31320795-313210... 27 2.8
08_02_1485 - 27466761-27467753 27 3.8
04_04_1158 - 31342934-31343272,31343508-31343658,31343745-313439... 27 3.8
02_05_1360 + 35942493-35942682,35942799-35942858,35943099-359432... 27 3.8
05_07_0339 - 29375424-29377166,29377272-29377441,29377888-293780... 27 5.0
04_03_1018 + 21753634-21753640,21754282-21754315,21754413-217544... 27 5.0
03_05_0751 - 27389910-27392105 27 5.0
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 27 5.0
01_01_0095 + 733307-734060,734779-734802,735029-736098 27 5.0
12_01_0672 + 5731288-5731356,5732032-5732117,5732634-5732724,573... 26 6.6
08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,602... 26 6.6
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 26 6.6
05_04_0017 + 17180991-17181074,17181657-17181759,17181794-17182014 26 6.6
05_03_0188 + 9417186-9417306,9417418-9417604,9417669-9417801,941... 26 6.6
05_01_0314 - 2466617-2467060 26 6.6
03_05_1088 + 30301654-30303480 26 6.6
02_01_0336 + 2397648-2397812,2398367-2398441,2398860-2398975,239... 26 6.6
02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 26 8.7
01_05_0789 + 25231013-25231570,25231684-25231761,25232590-252326... 26 8.7
>04_04_1157 -
31333870-31334220,31334440-31334590,31334678-31334909,
31335001-31335211,31335517-31335635,31335720-31335953,
31336000-31336201,31336297-31336676,31336792-31336856,
31337362-31337427,31337883-31337957,31338233-31338304,
31338994-31339062,31339150-31339221,31339325-31339396,
31339791-31339862,31339947-31340018,31340474-31340545,
31340645-31340828,31341474-31341588
Length = 961
Score = 32.7 bits (71), Expect = 0.076
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 161 ARICSLWSPESREALNNVTLLVAFRIQNRDATSKPIWIAE 42
A +C+ WSP R ++ V ++A ++ D +KP +I E
Sbjct: 878 ALLCTQWSPHQRAPMSRVVSMLAGDVEVPDVLTKPSYITE 917
>09_04_0593 -
18825741-18826702,18826994-18827875,18828687-18828775,
18828942-18829080,18829405-18829531,18829629-18829838
Length = 802
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -3
Query: 288 VREEPQFRTFGYALGRAAGGAKLP-SAGLCLNASKAEASLAESGK 157
+++EP+FR F + R G A P +AG+ N + A +++++S K
Sbjct: 691 IKDEPEFRAFTGSGNRLDGKASKPLAAGISSNPAAASSAISDSNK 735
>04_04_1349 - 32811733-32813040
Length = 435
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 35 HRSPRSKWASTSRLGFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRH 205
H P S W R+ +L+ S L P + S+ S++LP +L +AL H
Sbjct: 116 HSLPDSAWRDAFRMSRPAFFQLLHSLALSDP-AAASSSSLALPPDHKLGAALFRLAH 171
>01_01_0117 + 864966-865686,866860-866883,867006-868063
Length = 600
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 152 CSLWSPESREALNNVTLLVAFRIQNRDATSKP 57
C W+P++R ++ V ++ R+QN KP
Sbjct: 559 CIQWNPKNRPSMTKVVNMLTGRLQNLQVPPKP 590
>01_01_0108 + 793499-794413
Length = 304
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 152 CSLWSPESREALNNVTLLVAFRIQNRDATSKPIWIAEIDAI 30
C W+P +R ++ V ++ R+QN KP E A+
Sbjct: 263 CIQWNPRNRPSMTKVVNMLTGRLQNIQVPPKPFVSYESHAV 303
>01_01_0098 + 744582-745380,746107-746130,746500-747569
Length = 630
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -1
Query: 152 CSLWSPESREALNNVTLLVAFRIQNRDATSKP 57
C W+P +R ++ V ++ R+QN KP
Sbjct: 589 CIQWNPRNRPSMTKVVNMITGRLQNIQVPPKP 620
>08_01_0682 +
5974622-5974745,5976182-5976371,5976953-5977024,
5977482-5977553,5977688-5977759,5977842-5977913,
5978690-5978761,5978855-5978926,5979017-5979091,
5979529-5979594,5979821-5979885,5979975-5980354,
5980438-5980636,5980713-5980763,5980955-5981073,
5981190-5981400,5981524-5981755,5981842-5981992,
5982089-5982447,5982750-5982768
Length = 890
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 161 ARICSLWSPESREALNNVTLLVAFRIQNRDATSKPIWIAE 42
A +C+ SP R +++ V ++A I+ + +KP +I E
Sbjct: 798 ALLCTQGSPHQRPSMSRVMAILAGDIEVTEVVTKPSYITE 837
>01_01_0102 +
769442-770159,770710-770805,771340-771363,771470-772542
Length = 636
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -1
Query: 152 CSLWSPESREALNNVTLLVAFRIQNRDATSKP 57
C W+P+ R ++ V ++ R+QN KP
Sbjct: 595 CIQWNPKDRPSMTKVVNMLTGRLQNLQVPPKP 626
>07_03_0626 + 20060013-20060273,20061017-20061274
Length = 172
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 168 RLGWLRP*RRSGIIP 212
RLGWLRP R S ++P
Sbjct: 32 RLGWLRPSRLSAVVP 46
>06_03_1200 -
28352647-28352712,28353097-28353216,28353314-28353466,
28354652-28354804,28354890-28354967
Length = 189
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 41 SPRSKWASTSRLGFECETRLVKSH 112
+P S+W +T G+ CE L H
Sbjct: 119 APGSRWVATKVTGYRCELELTADH 142
>04_04_1156 - 31319747-31320085,31320556-31320706,31320795-31321026,
31321121-31321331,31321646-31321764,31321835-31322032,
31322163-31322364,31322456-31322832,31322937-31323007,
31326264-31326329,31326414-31326479,31326761-31326835,
31326944-31327018,31327115-31327186,31327683-31327904,
31328012-31328083,31328425-31328496,31329410-31329481,
31329716-31329896,31332132-31332237
Length = 992
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -1
Query: 161 ARICSLWSPESREALNNVTLLVAFRIQNRDATSKPIWIAE 42
A +C+ SP R +++ V ++A ++ + +KP +I E
Sbjct: 913 ALLCTQGSPHQRPSMSRVVTMLAGDVEVPEVVTKPSYITE 952
>08_02_1485 - 27466761-27467753
Length = 330
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 122 PPDSRGSTVSISLPDSARLASALEAFRHNPA 214
PP + G +S +P A LA++L + NPA
Sbjct: 39 PPSATGPVLSRDVPLDASLATSLRLYLPNPA 69
>04_04_1158 -
31342934-31343272,31343508-31343658,31343745-31343976,
31344173-31344284,31344572-31344690,31344772-31344936,
31345049-31345247,31345351-31345733,31345838-31345902,
31346003-31346047,31346402-31346467,31346707-31346778,
31346907-31346981,31347086-31347157,31347255-31347326,
31347954-31348022,31348109-31348180,31348280-31348351,
31348756-31348827,31349295-31349366,31349528-31349711,
31350082-31350220
Length = 948
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 161 ARICSLWSPESREALNNVTLLVAFRIQNRDATSKPIWIAE 42
A +C+ SP R ++ V ++A ++ + +KP +I E
Sbjct: 869 ALLCTQGSPHQRPPMSRVVTMLAGDVEAPEVVTKPSYITE 908
>02_05_1360 +
35942493-35942682,35942799-35942858,35943099-35943217,
35945405-35945449,35945598-35945676,35945777-35945838,
35945932-35946037,35946193-35946253,35947097-35947167,
35947459-35947598,35947887-35947994
Length = 346
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = -1
Query: 155 ICSLWSPESR----EALNNVTLLVAFRIQNRDATSKPIWIAEIDAIGFF 21
I + WSPE + E+ NVT V I N ++P AIGF+
Sbjct: 116 ISTRWSPEIKKEIKESRINVTSKVVNYINNASGDARPSVFVSATAIGFY 164
>05_07_0339 - 29375424-29377166,29377272-29377441,29377888-29378030,
29378363-29378478,29378576-29378814,29378909-29379110,
29379212-29379430,29379657-29379724,29379806-29379812,
29380404-29380616
Length = 1039
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/66 (27%), Positives = 25/66 (37%)
Frame = -3
Query: 252 ALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKPR 73
ALG GG + G +KA S G + R GGS+ + S SK +
Sbjct: 953 ALGGGGGGTERSWLGQLREMAKASFSKEGQGGEAEASGSRAKGGSRSMSSVASSSDSKAK 1012
Query: 72 RDVEAH 55
+H
Sbjct: 1013 GPENSH 1018
>04_03_1018 +
21753634-21753640,21754282-21754315,21754413-21754432,
21754485-21755782
Length = 452
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 252 ALGRAAGGAKLPSAGLCLNASKAEASLA 169
ALG A P G CLN K+EASLA
Sbjct: 206 ALGLMPSSAASPQLG-CLNVLKSEASLA 232
>03_05_0751 - 27389910-27392105
Length = 731
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -3
Query: 240 AAGGAKLPSAG--LCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTS 97
A G AK AG + LN SKAE + + ++ E SKQ F S
Sbjct: 246 AGGVAKRQEAGKAISLNVSKAEVLKVKKNRQSEDLDVMEGRNSKQSAFCS 295
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +2
Query: 80 FECETRLVKSHCLE---PPDSRGSTVSISLPDSARLASALEAFRH 205
F + RL K HCLE P+S+ S+V +++ + A+ E H
Sbjct: 524 FMWDMRLSKKHCLELIGHPESQFSSVKLNIDNRTVFAATKEGTVH 568
>01_01_0095 + 733307-734060,734779-734802,735029-736098
Length = 615
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 152 CSLWSPESREALNNVTLLVAFRIQNRDATSKP 57
C W+P +R ++ ++ R+QN KP
Sbjct: 574 CIQWNPRNRPSMTKAVNMITGRLQNIQVPPKP 605
>12_01_0672 + 5731288-5731356,5732032-5732117,5732634-5732724,
5732886-5732935,5733339-5733408,5733508-5733617,
5733943-5734463,5734856-5734949,5735095-5735225,
5735241-5736274,5736383-5736457,5736615-5737104,
5737375-5738009,5738166-5738378
Length = 1222
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -3
Query: 234 GGAK---LPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKPRRD 67
GGAK +P++ LC ++ +A +S E KD + +S + C + +++ P R+
Sbjct: 1061 GGAKEVKVPASDLCNHSCQANSSPTEGKKDS-KIPILDSTEDRSCSNNAELNNRLPNRN 1118
>08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,
6027187-6027258,6027354-6027425,6027784-6027855,
6027980-6028051,6028134-6028205,6028483-6028554,
6028791-6028865,6028970-6029041,6029134-6029199,
6029267-6029332,6029409-6029453,6029542-6029606,
6029697-6030076,6030455-6030653,6030725-6030883,
6030966-6031084,6031156-6031200,6031226-6031791,
6031871-6032021,6032117-6032454,6033702-6033765,
6034329-6034370,6035572-6035575,6035853-6036039,
6037252-6037323,6037687-6037758,6037867-6037938,
6038019-6038090,6038651-6038725,6038815-6038886,
6038988-6039053,6039163-6039228,6039348-6039392,
6039469-6039533,6039615-6039994,6040070-6040202,
6040354-6040512,6040599-6040717,6040805-6041015,
6041155-6041386,6041469-6041619,6041725-6042084
Length = 1952
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -1
Query: 155 ICSLWSPESREALNNVTLLVAFRIQNRDATSKPIWIAEIDAIG 27
+C+ SP R ++ V ++ I D +KP +I E+ G
Sbjct: 1868 LCTQGSPHQRPPMSRVVAMLTGDIPVSDVVAKPNYIIELQLRG 1910
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 89 RIQNRDATSKPIWIAEIDAIG 27
RI ++A KP W+ ++DA+G
Sbjct: 398 RILWKEAEGKPDWVKDLDAVG 418
>05_04_0017 + 17180991-17181074,17181657-17181759,17181794-17182014
Length = 135
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -3
Query: 252 ALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVE---PRESGGSKQC 109
+L + G AK + A + ++LA G + V PR+SGGS++C
Sbjct: 82 SLWKVVGAAKHGGGPVAAMARQLPSALATLGAATVPVGASGPRDSGGSRRC 132
>05_03_0188 + 9417186-9417306,9417418-9417604,9417669-9417801,
9418673-9418752,9421940-9422011,9422211-9422282,
9422361-9422432,9422720-9422791,9423038-9423109,
9423335-9423406,9423497-9423568,9423648-9423722,
9423824-9423895,9424072-9424137,9424223-9424299,
9424642-9425021,9425112-9425310,9425380-9425538,
9425620-9425738,9425942-9426092,9426257-9426488,
9426573-9426723,9426808-9427125
Length = 1007
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = -1
Query: 161 ARICSLWSPESREALNNVTLLVAFRIQNRDATSKPIWIAE 42
A +C+ SP R ++ V ++ ++ + +KP +I E
Sbjct: 935 ALLCTQGSPHQRPPMSKVVAMLTGEVEVAEVVTKPSYITE 974
>05_01_0314 - 2466617-2467060
Length = 147
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 248 SAERPVVRSYHPRDYA*TPLRPK 180
+A+RP SYHP + A PL K
Sbjct: 114 AADRPACASYHPAEDAELPLNQK 136
>03_05_1088 + 30301654-30303480
Length = 608
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 243 RAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGG 121
R+ G+ L ++ C N AE + K++L +EP E GG
Sbjct: 532 RSIWGSILSASSACQNTEVAEIA----SKELLCLEPAEEGG 568
>02_01_0336 +
2397648-2397812,2398367-2398441,2398860-2398975,
2399155-2399269,2399360-2399488,2399809-2399856,
2400369-2400448,2400628-2400824,2400916-2401202,
2401281-2401307,2401353-2401538,2401633-2402094,
2402201-2402350,2402612-2402687,2402851-2402978,
2403244-2403435,2403559-2403690,2403767-2403889,
2404128-2404346,2404518-2404679
Length = 1022
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 141 EPRESGGSKQCDFTSRVSHSKPRRDVEAHLDRGDRCYR 28
EP E K C++ +R H P+ + A+L++ RCY+
Sbjct: 58 EPNERRIGKLCEYVARNHHRVPK--ITAYLEQ--RCYK 91
>02_01_0083 -
566201-567127,567223-567464,567623-567880,568173-568298,
568420-568489
Length = 540
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 161 ARICSLWSPESREALNNVTLLVA 93
AR C W PESR ++ V ++A
Sbjct: 449 ARECLQWEPESRPTMSEVVQILA 471
>01_05_0789 +
25231013-25231570,25231684-25231761,25232590-25232659,
25232743-25232812,25233262-25233469,25233546-25233716
Length = 384
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +2
Query: 38 RSPRSKWASTSRLGFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPAD 217
R R W+ + G + + R +++ LP+ RL AL A R A+
Sbjct: 55 RYRRDAWSYAASDGDSSSSSAAAAAAAASSGRRDDEIALQLPELRRLLEALRASRGRGAE 114
Query: 218 G 220
G
Sbjct: 115 G 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,669,987
Number of Sequences: 37544
Number of extensions: 205417
Number of successful extensions: 661
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -