Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0253
(284 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 0.55
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 0.55
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 0.97
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 0.97
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 2.2
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 21 3.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 3.0
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 3.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 3.9
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 20 5.2
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 19 9.0
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 0.55
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 121 VEVRRRSGCRYCERSCCVA 177
++ R+R+ C+YC C+A
Sbjct: 154 IDKRQRNRCQYCRYQKCLA 172
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 0.55
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 121 VEVRRRSGCRYCERSCCVA 177
++ R+R+ C+YC C+A
Sbjct: 154 IDKRQRNRCQYCRYQKCLA 172
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 0.97
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1
Query: 224 HSAATTPQCAGPPTAAAT 171
H A T CA PP AA +
Sbjct: 1743 HEHAMTEGCASPPPAATS 1760
Score = 19.4 bits (38), Expect = 9.0
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2
Query: 206 AWWQRCAAPPSPQRAFLAYCDRNRQ 280
A + CA+PP + + R RQ
Sbjct: 1746 AMTEGCASPPPAATSMKSVSSRRRQ 1770
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 0.97
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1
Query: 224 HSAATTPQCAGPPTAAAT 171
H A T CA PP AA +
Sbjct: 1739 HEHAMTEGCASPPPAATS 1756
Score = 19.4 bits (38), Expect = 9.0
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2
Query: 206 AWWQRCAAPPSPQRAFLAYCDRNRQ 280
A + CA+PP + + R RQ
Sbjct: 1742 AMTEGCASPPPAATSMKSVSSRRRQ 1766
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 2.2
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +1
Query: 136 RSGCRYCERSCCVAAAVGGPA 198
R+ C+YC C+A + A
Sbjct: 117 RNRCQYCRLKKCIAVGMSRDA 137
Score = 19.4 bits (38), Expect = 9.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 174 DAARPLAVSAPAPSP 130
D+ +PL +S +PSP
Sbjct: 870 DSQQPLNLSKKSPSP 884
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 21.0 bits (42), Expect = 3.0
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +1
Query: 136 RSGCRYCERSCCVAAAV 186
R+ C+YC C+A +
Sbjct: 68 RNRCQYCRLKKCIAVGM 84
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 3.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 150 SAPAPSPDLDFYLSAYMGGKLTAHMVLSGHRNP 52
++PA S D S GG A+++L NP
Sbjct: 243 ASPADSGVSDVESSTSSGGNEDANLLLKARLNP 275
Score = 19.8 bits (39), Expect = 6.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 73 VKWSPEPIDSFYSTTAAPPLKPE 5
V++SP +++ T AAP + E
Sbjct: 34 VEFSPMELNALVGTPAAPNMPAE 56
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.6 bits (41), Expect = 3.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 157 ERSCCVAAAVGGPA 198
ER+ C+AAAV P+
Sbjct: 164 ERNVCIAAAVKVPS 177
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.6 bits (41), Expect = 3.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 157 ERSCCVAAAVGGPA 198
ER+ C+AAAV P+
Sbjct: 254 ERNVCIAAAVKVPS 267
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 20.2 bits (40), Expect = 5.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 176 ATQHDRSQYLHPLRL 132
AT+HDRS + +R+
Sbjct: 481 ATEHDRSVMIQAIRV 495
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 19.4 bits (38), Expect = 9.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 195 RALWRGGSAVPPHLHLRELF 254
RAL GG+ +P H L E F
Sbjct: 131 RALAAGGNHLPFHEKLVESF 150
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,063
Number of Sequences: 438
Number of extensions: 1987
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5619645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -