Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0252
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81116-1|CAB03301.1|  347|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U40799-3|AAA81481.1|  323|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U88166-1|ABA03116.1|  232|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81536-7|CAB04367.1|  338|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z83111-3|CAB05536.1|  361|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U28737-2|AAA68272.1|  455|Caenorhabditis elegans Patterned expre...    28   8.0  
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl...    28   8.0  
AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical ...    28   8.0  
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ...    28   8.0  

>Z81116-1|CAB03301.1|  347|Caenorhabditis elegans Hypothetical
           protein T06C12.1 protein.
          Length = 347

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 521 PF*IQNALNWKNIFSNVTGVSKFYSFIFYFI 429
           P+   N+LNWK I+   TG+  F  F  YF+
Sbjct: 184 PYGFDNSLNWKGIYFLSTGI--FLVFFHYFV 212


>U40799-3|AAA81481.1|  323|Caenorhabditis elegans Hypothetical
           protein F42C5.5 protein.
          Length = 323

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 131 HPYLSSVYSFF*ICCRTKFDAVLK*KNNFIKTMKL 235
           H + SSVY+FF  C ++   AV +   N+ KTM++
Sbjct: 276 HDFFSSVYTFFAFCVQS--SAVSETNENYAKTMEI 308


>U88166-1|ABA03116.1|  232|Caenorhabditis elegans Hypothetical
           protein M01A12.4 protein.
          Length = 232

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +2

Query: 131 HPYLSSVYSFF*ICCRTKFDAVLK*KNNFIKTMKLC*ILNNNI 259
           H + SS+Y+FF  C   +  AV +   N++K+M++     N++
Sbjct: 169 HDFFSSIYTFFAFC--VQCSAVSETDENYVKSMEVSDFYGNHV 209


>Z81536-7|CAB04367.1|  338|Caenorhabditis elegans Hypothetical
           protein F40D4.9a protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -2

Query: 158 MNRLRKDRGEKIRLFPSRVHFYSIELIN-RKMHFYSPLASSV 36
           +N++ + R EK+ +FP   HFY + +I+   + FY+ L++ V
Sbjct: 67  VNKVNRRRDEKMIIFPITNHFYKMVMISVIFLIFYTALSTLV 108


>Z83111-3|CAB05536.1|  361|Caenorhabditis elegans Hypothetical
           protein F57G8.4 protein.
          Length = 361

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 509 QNALNWKNIFSNVTGVSKFYSFIFYFINDTKNG*TY 402
           Q A  WK  F  V GVS F+S  +YF  +  N  T+
Sbjct: 137 QPAFGWKINFI-VLGVSTFFSIFYYFRYEVVNNGTF 171


>U28737-2|AAA68272.1|  455|Caenorhabditis elegans Patterned
           expression site protein23 protein.
          Length = 455

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = -1

Query: 357 VCNILIHGCIDLLFG-----NLKILFYIILN-SLCENAGILLFNIQHNFIVFIKLFFHFK 196
           +C IL+ G +++ FG     NL ++   I   S+C +  ++LF +Q N+     L F   
Sbjct: 299 ICKILL-GLVEIYFGIISRRNLHLISLCINGISMCASGVLILFGLQKNYPTIYVLVFLIG 357

Query: 195 TAS 187
            AS
Sbjct: 358 YAS 360


>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
           protein 23 protein.
          Length = 1043

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 360 DVCNILIHGCIDLLFGNLKILFYIILNSLCENAGI 256
           D   ++I GCI LL   L I+ + IL+ +CEN  +
Sbjct: 425 DYTTLIIGGCIVLLI-ILLIICFFILSRVCENRAL 458


>AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical
           protein F02E11.2 protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 303 ILFYIILNSLCENAGILLFNIQHNFIVFIKLFFHFK 196
           I +  I++S+C  +    F +   F  FI L FHFK
Sbjct: 372 IPYLFIIHSICFRSTFTFFRLIFPFFEFIFLKFHFK 407


>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1073

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 360 DVCNILIHGCIDLLFGNLKILFYIILNSLCENAGI 256
           D   ++I GCI LL   L I+ + IL+ +CEN  +
Sbjct: 455 DYTTLIIGGCIVLLI-ILLIICFFILSRVCENRAL 488


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,648,800
Number of Sequences: 27780
Number of extensions: 306057
Number of successful extensions: 714
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)