Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0251
(771 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05) 30 1.8
SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19) 30 2.4
SB_9209| Best HMM Match : Pyocin_S (HMM E-Value=1.8) 29 5.5
SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 28 9.6
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +3
Query: 225 EILGSSQENIAKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
+ L + AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 3 KFLDYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +3
Query: 225 EILGSSQENIAKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
+ L + AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 3 KFLDYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +3
Query: 225 EILGSSQENIAKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
+ L + AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 3 KFLDYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3
Query: 255 AKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 13 AKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3
Query: 255 AKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 32 AKAFAKNVFINQERKLEDRRRSDTVLVLTIN 62
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3
Query: 255 AKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 15 AKAFAKNVFINQERKLEDRRRSDTVLVLTIN 45
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +3
Query: 222 GEILGSSQENIAKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
GEILG + N ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 2 GEILGFRKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +3
Query: 225 EILGSSQENIAKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
+ L + N ++ AK VFINQERKLE RRR DT LVLT+N
Sbjct: 3 KFLDLRKTNYCESIAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3
Query: 225 EILGSSQENIAKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
+ L + N ++ + VFINQERKLE RRR DT LVLT+N
Sbjct: 3 KFLDLRKTNYCESICQDVFINQERKLEDRRRSDTVLVLTIN 43
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3
Query: 225 EILGSSQENIAKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
+ L + N ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 3 KFLDLRKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +3
Query: 255 AKAFAKGVFINQERKLEVRRRLDT 326
AKAFAK VFINQERKLE RRR DT
Sbjct: 5 AKAFAKNVFINQERKLEDRRRSDT 28
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3
Query: 225 EILGSSQENIAKAFAKGVFINQERKLEVRRRLDTALVLTVN 347
+ L + N ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 3 KFLDLRKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
>SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05)
Length = 288
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = -1
Query: 612 PPTKNGHAPPPTESRKSC*SVNPSGVRAW*DFPCWSN*AAGSTP 481
P APPPT + SC +VN +A D C SN AAG P
Sbjct: 238 PRPATTQAPPPTAAPGSCKAVNAWAGQANMDDWCNSNCAAGYCP 281
>SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19)
Length = 413
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/88 (29%), Positives = 38/88 (43%)
Frame = -1
Query: 624 RQIAPPTKNGHAPPPTESRKSC*SVNPSGVRAW*DFPCWSN*AAGSTPGGALPSIPLSFS 445
+QI T + PP + + P G P N A G TPGG PS+ +
Sbjct: 130 QQIITTTTTNYPPPAMPYQGAQGPYQPPGYYPGYGAPPQGNYAGGYTPGGQ-PSMGMDNG 188
Query: 444 FATILPPESKIFGFPEAARRAIVVTSAD 361
A+ PP S E A +++V+ SA+
Sbjct: 189 GASYAPPPSYSECAQEPA-KSVVLPSAN 215
>SB_9209| Best HMM Match : Pyocin_S (HMM E-Value=1.8)
Length = 365
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 368 DVTTMARRAASGKPKILDSG-GSMVAKLKLKGIDGRAPPGVEPAA*FDQHGKSHQARTPE 544
D+T ++ ++S + D G +VA + + +DG P PA G+S + TPE
Sbjct: 152 DMTDISHPSSSLDSRNYDKPEGIIVANPEQEKVDGETSPEKLPARATSDRGQSQRVPTPE 211
Query: 545 G 547
G
Sbjct: 212 G 212
>SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 517 PVLVKLSRRLHSWWCPSVNSFKFQLCNHTPPGVQNL 410
P++ R + CP + S F CN T GV+ L
Sbjct: 185 PIITDTECREIAGICPGLTSINFSYCNITDKGVEEL 220
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 442 CNHTPPGVQNLWFPGSCPPSHCSNVGGSLDD 350
C+ PG + PGSC P +C N+ GSL D
Sbjct: 854 CDRCMPG--SYGGPGSCKPCNC-NMAGSLSD 881
>SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 192 NWGHSYCDVRGEILGSSQENIAKAF 266
N+GHSY +RG I G +Q+ + A+
Sbjct: 635 NFGHSYVQIRGYIGGEAQKLFSGAY 659
>SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1696
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 409 WFPGSCPPSHCSNVGGSLDDIFTVRTRAVS 320
W+PG CPP C+ +L + TV + +S
Sbjct: 80 WYPGYCPPHKCAG-RNTLQECCTVYSPEIS 108
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 433 TPPGV-QNLWFPGSCPPSHCSNVGG 362
+P GV +N W PGS S+C++ GG
Sbjct: 174 SPYGVDENSWSPGSSQSSNCTSPGG 198
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,690,870
Number of Sequences: 59808
Number of extensions: 533626
Number of successful extensions: 1295
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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