Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0246
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69086-1|CAA48829.1| 3433|Homo sapiens utrophin (dystrophin rela... 31 4.0
AL590704-1|CAI10894.1| 3433|Homo sapiens utrophin protein. 31 4.0
AL590488-1|CAI16497.1| 3433|Homo sapiens utrophin protein. 31 4.0
AL513475-1|CAI13032.1| 3433|Homo sapiens utrophin protein. 31 4.0
AL513184-1|CAI40502.1| 3433|Homo sapiens utrophin protein. 31 4.0
AL357149-1|CAI40388.1| 3433|Homo sapiens utrophin protein. 31 4.0
AL024474-2|CAI23353.1| 3433|Homo sapiens utrophin protein. 31 4.0
>X69086-1|CAA48829.1| 3433|Homo sapiens utrophin (dystrophin related
protein) protein.
Length = 3433
Score = 30.7 bits (66), Expect = 4.0
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +2
Query: 89 LFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPELWQK 268
L+ + ET+ + D+E L +I+++ F+ LE+S D + I E+ Q+
Sbjct: 1756 LYQCLVTTETFETGVPFSDLEKLENDIENMLKFVEKHLESSDEDEKMDEESAQIEEVLQR 1815
Query: 269 HVANVLQPRNIYSNVSLKSSRTSYLKNTKPSKLNTIPKESISM 397
+ QP + N K L +T+ +K+ IP + M
Sbjct: 1816 GEEMLHQP--MEDNKKEKIRLQLLLLHTRYNKIKAIPIQQRKM 1856
>AL590704-1|CAI10894.1| 3433|Homo sapiens utrophin protein.
Length = 3433
Score = 30.7 bits (66), Expect = 4.0
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +2
Query: 89 LFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPELWQK 268
L+ + ET+ + D+E L +I+++ F+ LE+S D + I E+ Q+
Sbjct: 1756 LYQCLVTTETFETGVPFSDLEKLENDIENMLKFVEKHLESSDEDEKMDEESAQIEEVLQR 1815
Query: 269 HVANVLQPRNIYSNVSLKSSRTSYLKNTKPSKLNTIPKESISM 397
+ QP + N K L +T+ +K+ IP + M
Sbjct: 1816 GEEMLHQP--MEDNKKEKIRLQLLLLHTRYNKIKAIPIQQRKM 1856
>AL590488-1|CAI16497.1| 3433|Homo sapiens utrophin protein.
Length = 3433
Score = 30.7 bits (66), Expect = 4.0
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +2
Query: 89 LFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPELWQK 268
L+ + ET+ + D+E L +I+++ F+ LE+S D + I E+ Q+
Sbjct: 1756 LYQCLVTTETFETGVPFSDLEKLENDIENMLKFVEKHLESSDEDEKMDEESAQIEEVLQR 1815
Query: 269 HVANVLQPRNIYSNVSLKSSRTSYLKNTKPSKLNTIPKESISM 397
+ QP + N K L +T+ +K+ IP + M
Sbjct: 1816 GEEMLHQP--MEDNKKEKIRLQLLLLHTRYNKIKAIPIQQRKM 1856
>AL513475-1|CAI13032.1| 3433|Homo sapiens utrophin protein.
Length = 3433
Score = 30.7 bits (66), Expect = 4.0
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +2
Query: 89 LFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPELWQK 268
L+ + ET+ + D+E L +I+++ F+ LE+S D + I E+ Q+
Sbjct: 1756 LYQCLVTTETFETGVPFSDLEKLENDIENMLKFVEKHLESSDEDEKMDEESAQIEEVLQR 1815
Query: 269 HVANVLQPRNIYSNVSLKSSRTSYLKNTKPSKLNTIPKESISM 397
+ QP + N K L +T+ +K+ IP + M
Sbjct: 1816 GEEMLHQP--MEDNKKEKIRLQLLLLHTRYNKIKAIPIQQRKM 1856
>AL513184-1|CAI40502.1| 3433|Homo sapiens utrophin protein.
Length = 3433
Score = 30.7 bits (66), Expect = 4.0
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +2
Query: 89 LFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPELWQK 268
L+ + ET+ + D+E L +I+++ F+ LE+S D + I E+ Q+
Sbjct: 1756 LYQCLVTTETFETGVPFSDLEKLENDIENMLKFVEKHLESSDEDEKMDEESAQIEEVLQR 1815
Query: 269 HVANVLQPRNIYSNVSLKSSRTSYLKNTKPSKLNTIPKESISM 397
+ QP + N K L +T+ +K+ IP + M
Sbjct: 1816 GEEMLHQP--MEDNKKEKIRLQLLLLHTRYNKIKAIPIQQRKM 1856
>AL357149-1|CAI40388.1| 3433|Homo sapiens utrophin protein.
Length = 3433
Score = 30.7 bits (66), Expect = 4.0
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +2
Query: 89 LFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPELWQK 268
L+ + ET+ + D+E L +I+++ F+ LE+S D + I E+ Q+
Sbjct: 1756 LYQCLVTTETFETGVPFSDLEKLENDIENMLKFVEKHLESSDEDEKMDEESAQIEEVLQR 1815
Query: 269 HVANVLQPRNIYSNVSLKSSRTSYLKNTKPSKLNTIPKESISM 397
+ QP + N K L +T+ +K+ IP + M
Sbjct: 1816 GEEMLHQP--MEDNKKEKIRLQLLLLHTRYNKIKAIPIQQRKM 1856
>AL024474-2|CAI23353.1| 3433|Homo sapiens utrophin protein.
Length = 3433
Score = 30.7 bits (66), Expect = 4.0
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +2
Query: 89 LFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPELWQK 268
L+ + ET+ + D+E L +I+++ F+ LE+S D + I E+ Q+
Sbjct: 1756 LYQCLVTTETFETGVPFSDLEKLENDIENMLKFVEKHLESSDEDEKMDEESAQIEEVLQR 1815
Query: 269 HVANVLQPRNIYSNVSLKSSRTSYLKNTKPSKLNTIPKESISM 397
+ QP + N K L +T+ +K+ IP + M
Sbjct: 1816 GEEMLHQP--MEDNKKEKIRLQLLLLHTRYNKIKAIPIQQRKM 1856
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,869,965
Number of Sequences: 237096
Number of extensions: 1555949
Number of successful extensions: 4140
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4140
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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