Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0246
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    44   8e-07
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    44   8e-07
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    42   6e-06
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    42   6e-06
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    38   6e-05
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    38   6e-05
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    38   1e-04
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    25   0.42 
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    25   0.42 
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    25   0.73 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   2.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   2.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.9  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   3.9  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   3.9  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   9.0  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 44.4 bits (100), Expect = 8e-07
 Identities = 16/60 (26%), Positives = 37/60 (61%)
 Frame = +2

Query: 77  LCFALFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPE 256
           +CF L   V+ ++ Y+++ D++DI+ ++     L A++ C L+  PC   + + K+++P+
Sbjct: 11  VCF-LLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRNLPD 69



 Score = 31.9 bits (69), Expect = 0.005
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 256 AVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKYDPQGKH 390
           A+   C  C+  QK +  + ++ + D  P+ +   + KYDP G +
Sbjct: 70  ALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKYDPTGAY 114


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 44.4 bits (100), Expect = 8e-07
 Identities = 16/60 (26%), Positives = 37/60 (61%)
 Frame = +2

Query: 77  LCFALFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPE 256
           +CF L   V+ ++ Y+++ D++DI+ ++     L A++ C L+  PC   + + K+++P+
Sbjct: 11  VCF-LLGEVFSEDKYTTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRNLPD 69



 Score = 31.9 bits (69), Expect = 0.005
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 256 AVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKYDPQGKH 390
           A+   C  C+  QK +  + ++ + D  P+ +   + KYDP G +
Sbjct: 70  ALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKYDPTGAY 114


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 41.5 bits (93), Expect = 6e-06
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +2

Query: 71  YVLCFALFAAVYC--KETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKK 244
           Y+L F L   + C   E Y+++ DD+DI+ ++ N   L  +I C L+  PC     + KK
Sbjct: 4   YILLFVL-VTITCVIAEDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPCTNEGRELKK 62

Query: 245 DIPE 256
            +P+
Sbjct: 63  ILPD 66



 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 256 AVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKYDPQGKH 390
           A++  C KC   QKH   + +  +K K P+++E    KYD  G++
Sbjct: 67  ALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKYDSTGEY 111


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 41.5 bits (93), Expect = 6e-06
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +2

Query: 71  YVLCFALFAAVYC--KETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKK 244
           Y+L F L   + C   E Y+++ DD+DI+ ++ N   L  +I C L+  PC     + KK
Sbjct: 4   YILLFVL-VTITCVIAEDYTTKYDDMDIDRILQNGRILTNYIKCMLDEGPCTNEGRELKK 62

Query: 245 DIPE 256
            +P+
Sbjct: 63  ILPD 66



 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 256 AVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKYDPQGKH 390
           A++  C KC   QKH   + +  +K K P+++E    KYD  G++
Sbjct: 67  ALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKYDSTGEY 111


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 38.3 bits (85), Expect = 6e-05
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +1

Query: 256 AVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKYDPQGKH 390
           A+A  C KCT  Q+ + K+ ++ + +  P+ +++   KYDP  K+
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKY 115



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = +2

Query: 74  VLCFALFAAVYC-----KETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDF 238
           ++C  L AA+        E+Y+S+ D+++++ ++ +   L  +  C ++   C A   + 
Sbjct: 5   IICLVLMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNEL 64

Query: 239 KKDIPE 256
           K+ +P+
Sbjct: 65  KRVLPD 70


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 38.3 bits (85), Expect = 6e-05
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +1

Query: 256 AVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKYDPQGKH 390
           A+A  C KCT  Q+ + K+ ++ + +  P+ +++   KYDP  K+
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKY 115



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = +2

Query: 74  VLCFALFAAVYC-----KETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDF 238
           ++C  L AA+        E+Y+S+ D+++++ ++ +   L  +  C ++   C A   + 
Sbjct: 5   IICLVLMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNEL 64

Query: 239 KKDIPE 256
           K+ +P+
Sbjct: 65  KRVLPD 70


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +1

Query: 256 AVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKYDPQGK 387
           A+A  C KCT  Q+ + K+ ++ + +  P+ +++   KYDP  K
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKK 114



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = +2

Query: 74  VLCFALFAAVYC-----KETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDF 238
           ++C  L AA+        E+Y+S+ D+++++ ++ +   L  +  C ++   C A   + 
Sbjct: 5   IICLVLMAAIVLVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNEL 64

Query: 239 KKDIPE 256
           K+ +P+
Sbjct: 65  KRVLPD 70


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +1

Query: 268 ACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKY 372
           AC +C+P +    K+ L  ++   P+E+     +Y
Sbjct: 79  ACPQCSPEETRQIKKVLSHIQRTYPKEWSKIVQQY 113


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +1

Query: 268 ACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKY 372
           AC +C+P +    K+ L  ++   P+E+     +Y
Sbjct: 79  ACPQCSPEETRQIKKVLSHIQRTYPKEWSKIVQQY 113


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +2

Query: 143 DIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPELWQKH 271
           DI   + +   ++  + C L+   CD +    K+ +PE+   H
Sbjct: 22  DISKFLKDRPYVQKQLHCILDRGHCDVIGKKIKELLPEVLNNH 64


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 302 RCFWAGVHLPHASATA 255
           RC W G+H P  ++ A
Sbjct: 350 RCKWMGIHEPETTSDA 365


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 302 RCFWAGVHLPHASATA 255
           RC W G+H P  ++ A
Sbjct: 350 RCKWMGIHEPETTSDA 365


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/45 (22%), Positives = 20/45 (44%)
 Frame = -3

Query: 179 SENQYFPPKLQYPDRHFPSCMSLYSRQQRTVQNTARRNPSS*IIV 45
           +++  FPP  +   +H      +   Q   +QNT  +N    I++
Sbjct: 150 TQSVIFPPVYEILPQHHLDSRVIQEAQNIAIQNTQGKNNQQNILI 194


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = +1

Query: 235 FQKGH-S*AVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAF 360
           F K H + A    C KCT  QK    +  E      P+++  F
Sbjct: 62  FFKSHITEAFQTQCKKCTEIQKQNLDKLAEWFTTNEPEKWNHF 104


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = +1

Query: 235 FQKGH-S*AVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAF 360
           F K H + A    C KCT  QK    +  E      P+++  F
Sbjct: 62  FFKSHITEAFQTQCKKCTEIQKQNLDKLAEWFTTNEPEKWNHF 104


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 543 YFDYQNKNDNKQ 508
           YF Y +KNDN++
Sbjct: 79  YFLYTSKNDNEE 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,449
Number of Sequences: 438
Number of extensions: 3065
Number of successful extensions: 24
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)