Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0245
         (786 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like pro...    31   3.6  
AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.     31   3.6  
BC047713-1|AAH47713.1|  791|Homo sapiens DOCK11 protein protein.       31   6.2  
AY692226-1|AAU04438.1| 2073|Homo sapiens Cdc42-associated guanin...    31   6.2  
AL391280-3|CAI41411.1| 2077|Homo sapiens dedicator of cytokinesi...    31   6.2  
AL391237-2|CAI41407.1| 2077|Homo sapiens dedicator of cytokinesi...    31   6.2  
AK125641-1|BAC86230.1| 1215|Homo sapiens 1, beta, convertase) (C...    31   6.2  
AK056684-1|BAB71253.1|  881|Homo sapiens protein ( Homo sapiens ...    31   6.2  

>BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like
           protein rA9 protein.
          Length = 1649

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 23/61 (37%), Positives = 27/61 (44%)
 Frame = -1

Query: 501 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 322
           G  E  +VGS    G  S  EH           S  E++E  S  EDSED DG   LE+ 
Sbjct: 29  GDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEVA 87

Query: 321 G 319
           G
Sbjct: 88  G 88


>AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.
          Length = 1654

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 23/61 (37%), Positives = 27/61 (44%)
 Frame = -1

Query: 501 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 322
           G  E  +VGS    G  S  EH           S  E++E  S  EDSED DG   LE+ 
Sbjct: 34  GDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSED-DGETLLEVA 92

Query: 321 G 319
           G
Sbjct: 93  G 93


>BC047713-1|AAH47713.1|  791|Homo sapiens DOCK11 protein protein.
          Length = 791

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 317 WTKVSPRGSMPILYISMNCLTHRHSCTCRNFSRCYTPWRS 198
           W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 20  WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 59


>AY692226-1|AAU04438.1| 2073|Homo sapiens Cdc42-associated guanine
            nucleotide exchange factor ACG/DOCK11 protein.
          Length = 2073

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 317  WTKVSPRGSMPILYISMNCLTHRHSCTCRNFSRCYTPWRS 198
            W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 1302 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 1341


>AL391280-3|CAI41411.1| 2077|Homo sapiens dedicator of cytokinesis 11
            protein.
          Length = 2077

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 317  WTKVSPRGSMPILYISMNCLTHRHSCTCRNFSRCYTPWRS 198
            W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 1302 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 1341


>AL391237-2|CAI41407.1| 2077|Homo sapiens dedicator of cytokinesis 11
            protein.
          Length = 2077

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 317  WTKVSPRGSMPILYISMNCLTHRHSCTCRNFSRCYTPWRS 198
            W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 1302 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 1341


>AK125641-1|BAC86230.1| 1215|Homo sapiens 1, beta, convertase)
           (CASP1).  protein.
          Length = 1215

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 317 WTKVSPRGSMPILYISMNCLTHRHSCTCRNFSRCYTPWRS 198
           W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 444 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 483


>AK056684-1|BAB71253.1|  881|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32122 fis, clone PEBLM1000144, moderately
           similar to Trg. ).
          Length = 881

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 317 WTKVSPRGSMPILYISMNCLTHRHSCTCRNFSRCYTPWRS 198
           W KVSP+  + IL +   CL H      RN +R +  W S
Sbjct: 110 WNKVSPQELINILILLEVCLFHFRYMGKRNIARVHDAWLS 149


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,817,805
Number of Sequences: 237096
Number of extensions: 2068595
Number of successful extensions: 4525
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4525
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)