Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0245
         (786 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g01790.1 68414.m00098 K+ efflux antiporter, putative (KEA1) i...    31   0.87 
At5g18580.1 68418.m02196 tonneau 2 (TON2) identical to tonneau 2...    30   2.0  
At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-conta...    30   2.0  
At2g27110.2 68415.m03258 far-red impaired responsive protein, pu...    29   3.5  
At2g27110.1 68415.m03257 far-red impaired responsive protein, pu...    29   3.5  
At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein ...    28   6.1  

>At1g01790.1 68414.m00098 K+ efflux antiporter, putative (KEA1)
           identical to GB:AAD01191 GI:4101473 from [ Arabidopsis
           thaliana]; Monovalent cation:proton antiporter family 2
           (CPA2 family) member, PMID:11500563
          Length = 618

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +2

Query: 104 PMVNLDMKMKELCIMKLLDHILQPTMFEDI--KEIAKEYNIEKSCDKYMNVDALSSSWRC 277
           P V LD+    + I + LD    P  F D   KE+  +    ++C   + +DA  +++RC
Sbjct: 445 PFVALDVSSDRVTIGRSLD---LPVYFGDAGSKEVLHKIGAGRACAAVVALDAPGANYRC 501

Query: 278 IRWACSR 298
           + WA S+
Sbjct: 502 V-WALSK 507


>At5g18580.1 68418.m02196 tonneau 2 (TON2) identical to tonneau 2
           protein (TON2) GI:11494362 from [Arabidopsis thaliana];
           contains Pfam profile: PF00036 EF hand
          Length = 480

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 191 IKEIAKEYNIEKSCDKYMNVDALSSSWRCIRWAC 292
           ++++AK   ++K  D  +N D L++ W C+R  C
Sbjct: 89  VQKLAKYRFLKKQSDLLLNADDLAAMWVCLRENC 122


>At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-containing
            protein contains Pfam profile PF00226: DnaJ domain
          Length = 2554

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -1

Query: 501  GQVETLAVGSVEAR--GSKSVDEHASVDPFSHPARSPHENIEV 379
            G+ ET++ G V+A   GS  V+E  S DP S P ++P E + +
Sbjct: 2332 GRRETMSSGEVKAEEIGSDGVNE--STDPSSLPGQTPQERVRL 2372


>At2g27110.2 68415.m03258 far-red impaired responsive protein,
           putative similar to far-red impaired response protein
           FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282
          Length = 851

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 304 ETFVHT-NELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERIN 429
           ETF HT N ++ +     FRV  +  D   ++ T C+   R N
Sbjct: 495 ETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRAN 537


>At2g27110.1 68415.m03257 far-red impaired responsive protein,
           putative similar to far-red impaired response protein
           FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282
          Length = 851

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 304 ETFVHT-NELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERIN 429
           ETF HT N ++ +     FRV  +  D   ++ T C+   R N
Sbjct: 495 ETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRAN 537


>At3g60800.1 68416.m06801 zinc finger (DHHC type) family protein
           contains DHHC zinc finger domain PF01529
          Length = 307

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 594 VLWKYYGITVTDDNLVVIDWRKGVRRSLSQNDVMS 698
           +LW Y+ +  TD  +V  +WR        ++D ++
Sbjct: 74  LLWSYFSVVFTDPGVVPPNWRPSTDEERGESDPLN 108


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,531,141
Number of Sequences: 28952
Number of extensions: 310194
Number of successful extensions: 814
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)