Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0244
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.4  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   4.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   7.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.7  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 375 TTVLHHGHVQCGQEHTGADRRHD 307
           T+  HH +   G  HTG    HD
Sbjct: 39  TSYQHHFNSPAGNAHTGPTGTHD 61


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 400 STMPLGYPFDRPIDMAS 450
           +T P GYP D P  M S
Sbjct: 91  NTPPAGYPMDVPHGMGS 107


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 400 STMPLGYPFDRPIDMAS 450
           +T P GYP D P  M S
Sbjct: 91  NTPPAGYPMDVPHGMGS 107


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 388 SSDKHNGPSSWSCPMWARAYRCGPA 314
           S  ++ G ++  CP    A R GPA
Sbjct: 281 SQRRYTGRATCDCPNCQEAERLGPA 305


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 133 RIYPRVPFDSSCNG 174
           R+YP VPF S  +G
Sbjct: 357 RLYPSVPFISRVSG 370


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +3

Query: 531 DTSEMVMMKDDLTYLDSDMLVKRTYKDVXXXXXXXXXXHDIV 656
           D  + V  K    YL    L K+T++D+          +DIV
Sbjct: 361 DLQDEVSQKIRKYYLGEKKLSKKTFRDLVAMFSDRIFINDIV 402


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 133 RIYPRVPFDSSCNG 174
           R+YP VPF S  +G
Sbjct: 357 RLYPSVPFISRVSG 370


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 474  ELHVVSEEARHVNRSVKWISERHGGDT*APATS 376
            +L  + E  R +NR ++ + +    D  +PA S
Sbjct: 1101 QLRKIQESLRDLNRKIESLEKMQYPDLRSPAVS 1133


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 474  ELHVVSEEARHVNRSVKWISERHGGDT*APATS 376
            +L  + E  R +NR ++ + +    D  +PA S
Sbjct: 1101 QLRKIQESLRDLNRKIESLEKMQYPDLRSPAVS 1133


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +3

Query: 531 DTSEMVMMKDDLTYLDSDMLVKRTYKDVXXXXXXXXXXHDIV 656
           D  + V  K    YL    L KRT++++          +DIV
Sbjct: 361 DLQDEVSQKIRKYYLGEKKLSKRTFRELVAMFSDRIFINDIV 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,719
Number of Sequences: 336
Number of extensions: 3790
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)