Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0244
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC028036-1|AAH28036.1| 783|Homo sapiens family with sequence si... 32 2.3
AL035289-1|CAA22893.1| 781|Homo sapiens hypothetical protein pr... 32 2.3
AL022143-1|CAI18922.1| 783|Homo sapiens family with sequence si... 32 2.3
AK123336-1|BAC85583.1| 678|Homo sapiens protein ( Homo sapiens ... 32 2.3
AB161694-1|BAD34946.1| 783|Homo sapiens DBCCR1-like2 protein. 32 2.3
AB051534-1|BAB21838.1| 791|Homo sapiens KIAA1747 protein protein. 32 2.3
U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog pr... 30 6.9
BX640639-1|CAE45787.1| 610|Homo sapiens hypothetical protein pr... 30 6.9
BC073964-1|AAH73964.1| 957|Homo sapiens PHC1 protein protein. 30 6.9
BC017748-1|AAH17748.1| 447|Homo sapiens PHC1 protein protein. 30 6.9
BC002871-1|AAH02871.2| 481|Homo sapiens PHC1 protein protein. 30 6.9
AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like prote... 30 6.9
>BC028036-1|AAH28036.1| 783|Homo sapiens family with sequence
similarity 5, member B protein.
Length = 783
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 59 DSLSSFMYKLVNGKNTIVRSSMDMQGFIPEYLSTRRVME--SEMMPSGDGQTMVK--DWW 226
D+L S LV V+ + +Q +PEYL R V S + S +G+ + K D W
Sbjct: 238 DNLDSVSSVLVQSPENKVQL-LGLQVLLPEYLRERFVAAALSYITCSSEGELVCKENDCW 296
Query: 227 CKSRNGFPQNLC 262
CK FP+ C
Sbjct: 297 CKCSPTFPECNC 308
>AL035289-1|CAA22893.1| 781|Homo sapiens hypothetical protein
protein.
Length = 781
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 59 DSLSSFMYKLVNGKNTIVRSSMDMQGFIPEYLSTRRVME--SEMMPSGDGQTMVK--DWW 226
D+L S LV V+ + +Q +PEYL R V S + S +G+ + K D W
Sbjct: 236 DNLDSVSSVLVQSPENKVQL-LGLQVLLPEYLRERFVAAALSYITCSSEGELVCKENDCW 294
Query: 227 CKSRNGFPQNLC 262
CK FP+ C
Sbjct: 295 CKCSPTFPECNC 306
>AL022143-1|CAI18922.1| 783|Homo sapiens family with sequence
similarity 5, member B protein.
Length = 783
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 59 DSLSSFMYKLVNGKNTIVRSSMDMQGFIPEYLSTRRVME--SEMMPSGDGQTMVK--DWW 226
D+L S LV V+ + +Q +PEYL R V S + S +G+ + K D W
Sbjct: 238 DNLDSVSSVLVQSPENKVQL-LGLQVLLPEYLRERFVAAALSYITCSSEGELVCKENDCW 296
Query: 227 CKSRNGFPQNLC 262
CK FP+ C
Sbjct: 297 CKCSPTFPECNC 308
>AK123336-1|BAC85583.1| 678|Homo sapiens protein ( Homo sapiens
cDNA FLJ41342 fis, clone BRAWH2001940. ).
Length = 678
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 59 DSLSSFMYKLVNGKNTIVRSSMDMQGFIPEYLSTRRVME--SEMMPSGDGQTMVK--DWW 226
D+L S LV V+ + +Q +PEYL R V S + S +G+ + K D W
Sbjct: 133 DNLDSVSSVLVQSPENKVQL-LGLQVLLPEYLRERFVAAALSYITCSSEGELVCKENDCW 191
Query: 227 CKSRNGFPQNLC 262
CK FP+ C
Sbjct: 192 CKCSPTFPECNC 203
>AB161694-1|BAD34946.1| 783|Homo sapiens DBCCR1-like2 protein.
Length = 783
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 59 DSLSSFMYKLVNGKNTIVRSSMDMQGFIPEYLSTRRVME--SEMMPSGDGQTMVK--DWW 226
D+L S LV V+ + +Q +PEYL R V S + S +G+ + K D W
Sbjct: 238 DNLDSVSSVLVQSPENKVQL-LGLQVLLPEYLRERFVAAALSYITCSSEGELVCKENDCW 296
Query: 227 CKSRNGFPQNLC 262
CK FP+ C
Sbjct: 297 CKCSPTFPECNC 308
>AB051534-1|BAB21838.1| 791|Homo sapiens KIAA1747 protein protein.
Length = 791
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 59 DSLSSFMYKLVNGKNTIVRSSMDMQGFIPEYLSTRRVME--SEMMPSGDGQTMVK--DWW 226
D+L S LV V+ + +Q +PEYL R V S + S +G+ + K D W
Sbjct: 246 DNLDSVSSVLVQSPENKVQL-LGLQVLLPEYLRERFVAAALSYITCSSEGELVCKENDCW 304
Query: 227 CKSRNGFPQNLC 262
CK FP+ C
Sbjct: 305 CKCSPTFPECNC 316
>U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog
protein.
Length = 1004
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 527 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 646
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 856 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 895
>BX640639-1|CAE45787.1| 610|Homo sapiens hypothetical protein
protein.
Length = 610
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 527 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 646
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 462 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 501
>BC073964-1|AAH73964.1| 957|Homo sapiens PHC1 protein protein.
Length = 957
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 527 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 646
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 809 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 848
>BC017748-1|AAH17748.1| 447|Homo sapiens PHC1 protein protein.
Length = 447
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 527 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 646
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 299 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 338
>BC002871-1|AAH02871.2| 481|Homo sapiens PHC1 protein protein.
Length = 481
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 527 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 646
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 333 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 372
>AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like protein 1
variant protein.
Length = 1099
Score = 30.3 bits (65), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 527 RGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDELIT 646
RG D R+ + G H GQED R D+ +DE ++
Sbjct: 951 RGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALS 990
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,855,385
Number of Sequences: 237096
Number of extensions: 2353554
Number of successful extensions: 6366
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6366
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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