Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0244
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC006733-8|AAF60490.1| 600|Caenorhabditis elegans Hypothetical ... 30 1.8
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 29 2.4
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 29 2.4
U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g ... 28 5.6
U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g ... 28 5.6
U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g ... 28 5.6
Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical pr... 28 7.4
U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein. 28 7.4
U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinas... 28 7.4
Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81051-7|CAB02868.1| 167|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 9.8
>U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical
protein T27F7.1 protein.
Length = 208
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 98 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKD 220
K+T V SM +PE + T R M +EMM G + M+++
Sbjct: 104 KSTEVMKSMQQLVKVPEIMKTMREMSAEMMKLGIIEEMIEE 144
>AC006733-8|AAF60490.1| 600|Caenorhabditis elegans Hypothetical
protein Y32H12A.7 protein.
Length = 600
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 406 WWRYMSSSDKHNGPSSWSCPMWARAYR 326
WWRY+ S +H+GP+ WA R
Sbjct: 120 WWRYLLWSLQHSGPTFIKLGQWASTRR 146
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 515 HQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHD 634
H GH D +D G SH G G + HD +HD
Sbjct: 357 HDNGHGHSHDHNDHGHSH--GHDDHGHDSHGHSHDHNEHD 394
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 515 HQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHD 634
H GH D +D G SH G G + HD +HD
Sbjct: 375 HDNGHGHSHDHNDHGHSH--GHDDHGHDSHGHSHDHNEHD 412
>U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform c protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 98 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 190
+N + ++DM+ F P RR++E++ P
Sbjct: 104 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 134
>U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform b protein.
Length = 290
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 98 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 190
+N + ++DM+ F P RR++E++ P
Sbjct: 110 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 140
>U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform a protein.
Length = 363
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 98 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 190
+N + ++DM+ F P RR++E++ P
Sbjct: 183 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 213
>Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical
protein F43C1.2a protein.
Length = 376
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 125 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 226
D GF+ EY++TR E+M + G T D W
Sbjct: 182 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 215
>Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical
protein F43C1.2b protein.
Length = 444
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 125 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 226
D GF+ EY++TR E+M + G T D W
Sbjct: 250 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 283
>U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein.
Length = 376
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 125 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 226
D GF+ EY++TR E+M + G T D W
Sbjct: 182 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 215
>U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinase
protein.
Length = 444
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 125 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 226
D GF+ EY++TR E+M + G T D W
Sbjct: 250 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 283
>Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical
protein C24H11.8b protein.
Length = 676
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 486 DLQKRPRQSNTSKTVDTSEMVMM 554
D+QK PR++N+++ + EM+MM
Sbjct: 417 DMQKPPRRNNSARELREKEMMMM 439
>Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical
protein C24H11.8a protein.
Length = 653
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 486 DLQKRPRQSNTSKTVDTSEMVMM 554
D+QK PR++N+++ + EM+MM
Sbjct: 417 DMQKPPRRNNSARELREKEMMMM 439
>Z81051-7|CAB02868.1| 167|Caenorhabditis elegans Hypothetical
protein C55A6.8 protein.
Length = 167
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -1
Query: 223 PVLDHCLAISGRHHFAFHYTTSRKVLWDKSLHIHGATDDGVLSVDQFVHKAGK 65
PVL + +H+ H +++ D +HI T S+D FV K G+
Sbjct: 7 PVLSYTKIWGWPYHYVEHCIFDLRIIKDPRIHILPLTVTCDKSIDDFVIKVGE 59
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 264 APRYDWRFGDADVRHRVAGPHRYALAHIGHDHDEG 368
AP + G+ H G H +A AH GH + G
Sbjct: 512 APAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHG 546
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,275,728
Number of Sequences: 27780
Number of extensions: 365017
Number of successful extensions: 1107
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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