Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0241
         (441 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           25   1.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.2  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    23   4.8  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   4.8  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     23   6.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   6.4  

>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 93  ARRSFSGLPGPLGQGEHADSFSVARV 170
           A RS S L  PLG   HA   +V RV
Sbjct: 91  AGRSTSSLTVPLGTSRHASGGTVVRV 116


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 66  GDNCKPQSPARRSFSGLPGPLG 131
           G  C P+  A +   GLPGP+G
Sbjct: 91  GGCCLPKCFAEKGNRGLPGPMG 112



 Score = 23.4 bits (48), Expect = 3.6
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +3

Query: 3   KGRDVINASL*LALTRNSSFMGDNCKPQSPARRSFSGLPGPLGQ 134
           KG +V  A+     T      GD  +P  P R    G  G  GQ
Sbjct: 287 KGEEVYGATGTTTTTGPKGEKGDRGEPGEPGRSGEKGQAGDRGQ 330


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 362 ICLVNSGNERDSSLLNRRRYLG 297
           ICL+ + +  D+S LN++ + G
Sbjct: 44  ICLIQNESRYDTSALNKKNWNG 65


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 88  DWGLQLSPINEEFLVSASHK 29
           D GL+++P   EF++ +SH+
Sbjct: 670 DNGLKIAPTKTEFIMVSSHQ 689


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 91  GDWGLQLSPINEEFLV 44
           G  G+QLSP+NE  ++
Sbjct: 58  GYGGVQLSPVNENIVI 73


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
 Frame = +3

Query: 54  SSFMGDNCKPQSPARRSFSGLP---GPLGQGEHADSFSVARVRPRTSKG 191
           +S  G N +P  P  R   G+P   GP G    A      R  P+  KG
Sbjct: 310 ASEKGQNGEPGVPGLRGNDGIPGLEGPSGPKGDAGVPGYGRPGPQGEKG 358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,964
Number of Sequences: 2352
Number of extensions: 8763
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)