Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0236
         (468 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB037805-1|BAA92622.1|  652|Homo sapiens KIAA1384 protein protein.     31   2.0  
BC068223-1|AAH68223.1|  195|Homo sapiens SSH2 protein protein.         31   2.6  
BC011636-1|AAH11636.2|  178|Homo sapiens SSH2 protein protein.         31   2.6  
BC008941-1|AAH08941.1|  195|Homo sapiens SSH2 protein protein.         31   2.6  
AB072359-1|BAB84118.1|  195|Homo sapiens hSSH-2A protein.              31   2.6  
BC033899-1|AAH33899.2|  775|Homo sapiens GLIS family zinc finger...    29   6.1  
AL158012-1|CAH70655.1|  775|Homo sapiens GLIS family zinc finger...    29   6.1  
AL137071-1|CAI39818.1|  775|Homo sapiens GLIS family zinc finger...    29   6.1  
AL133283-1|CAH72449.1|  775|Homo sapiens GLIS family zinc finger...    29   6.1  

>AB037805-1|BAA92622.1|  652|Homo sapiens KIAA1384 protein protein.
          Length = 652

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = +2

Query: 35  KVSWKFIALWENNKVYFKILNTERNQYLVLGVGT-NPNGDHMAFGVNSVDSFRAQWYLQP 211
           K +WK + +   N  +  ++  E   +++ G    NPNG H    V+  D     W   P
Sbjct: 373 KKTWKILTIMPYNSAHHCVVEVENFLFVLGGEDQWNPNGKHSTNFVSRYDPRFNSWIQLP 432

Query: 212 AKYDKDNLFYIYNRD 256
              ++   FY    D
Sbjct: 433 PMQERRASFYACRLD 447


>BC068223-1|AAH68223.1|  195|Homo sapiens SSH2 protein protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -3

Query: 211 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 77
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 139 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 180


>BC011636-1|AAH11636.2|  178|Homo sapiens SSH2 protein protein.
          Length = 178

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -3

Query: 211 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 77
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 122 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 163


>BC008941-1|AAH08941.1|  195|Homo sapiens SSH2 protein protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -3

Query: 211 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 77
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 139 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 180


>AB072359-1|BAB84118.1|  195|Homo sapiens hSSH-2A protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -3

Query: 211 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 77
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 139 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 180


>BC033899-1|AAH33899.2|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 360 PSVMFGT-SDHSTIVSPGHAVTRGFKRPRQCQSLAVSRL 247
           PS +FGT S HS   SP H+ TR      + ++L++S L
Sbjct: 115 PSYLFGTESSHSPYPSPRHSSTRSHSARSKKRALSLSPL 153


>AL158012-1|CAH70655.1|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 360 PSVMFGT-SDHSTIVSPGHAVTRGFKRPRQCQSLAVSRL 247
           PS +FGT S HS   SP H+ TR      + ++L++S L
Sbjct: 115 PSYLFGTESSHSPYPSPRHSSTRSHSARSKKRALSLSPL 153


>AL137071-1|CAI39818.1|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 360 PSVMFGT-SDHSTIVSPGHAVTRGFKRPRQCQSLAVSRL 247
           PS +FGT S HS   SP H+ TR      + ++L++S L
Sbjct: 115 PSYLFGTESSHSPYPSPRHSSTRSHSARSKKRALSLSPL 153


>AL133283-1|CAH72449.1|  775|Homo sapiens GLIS family zinc finger 3
           protein.
          Length = 775

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 360 PSVMFGT-SDHSTIVSPGHAVTRGFKRPRQCQSLAVSRL 247
           PS +FGT S HS   SP H+ TR      + ++L++S L
Sbjct: 115 PSYLFGTESSHSPYPSPRHSSTRSHSARSKKRALSLSPL 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,649,423
Number of Sequences: 237096
Number of extensions: 1537067
Number of successful extensions: 2662
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2662
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)