Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0233
         (553 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    25   1.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   2.9  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   6.7  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 328 RASSERFQWYLVPDKN 281
           RA +E+F WY+ P+ N
Sbjct: 213 RALAEKFDWYVFPNAN 228


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/22 (40%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = +2

Query: 92   HSIHAKFWLIGARN-SNRSVQN 154
            +++  +FW++GARN + R+V N
Sbjct: 1371 NTMQLRFWIVGARNVAKRTVFN 1392


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 250 TIASLTILSRLTSKRTAMMSNSFSEN*REPMSILN 146
           TI +LT+    + +RT  +  S+  N RE    LN
Sbjct: 305 TITALTVWKFASIRRTMTIPRSYGTNVRESRRQLN 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,229
Number of Sequences: 2352
Number of extensions: 10499
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)