Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0224
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
 Frame = -1

Query: 262 FICILDKFMKHFLFRKLKWNFRYCFK-----QYCEFYQVFFKI 149
           ++ ++  F K   + +L  N   C K     +YC +Y  FF +
Sbjct: 81  YVIVVTTFYKRRTWTRLLKNLESCAKIKKTKRYCYYYYAFFGV 123


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 184 QYCEFYQVFFKISSLMNNIFVRVDGDRCMK 95
           Q CEF ++ F +  L+  +   +D   C K
Sbjct: 462 QLCEFSRLNFSVEHLLMELSRAIDSVACSK 491


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 244  KFMKHFLFRKLKWNF 200
            +F+KH L    KWNF
Sbjct: 1498 RFIKHVLQFLEKWNF 1512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,822
Number of Sequences: 336
Number of extensions: 2845
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)