Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0222
(723 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 25 2.4
DQ383819-1|ABD38144.1| 377|Anopheles gambiae abdominal-B protein. 25 3.1
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 24 5.5
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 24 5.5
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 24 5.5
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 7.2
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 7.2
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 7.2
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 23 7.2
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 7.2
AM182454-1|CAJ65692.1| 182|Anopheles gambiae globin 2 protein. 23 9.6
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 25.0 bits (52), Expect = 2.4
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -1
Query: 204 GLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 97
G P ++ R W GV+ KR P S ++D
Sbjct: 406 GKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMD 441
>DQ383819-1|ABD38144.1| 377|Anopheles gambiae abdominal-B protein.
Length = 377
Score = 24.6 bits (51), Expect = 3.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 228 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 121
+P S++ G++ P + WTG V RK+ P
Sbjct: 241 NPGSSLSVGVSGVGSCTPSNPLEWTGNVTVRKKRKP 276
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 219 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 97
P + P + PR WTGV+ T PN+ ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 219 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 97
P + P + PR WTGV+ T PN+ ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 219 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 97
P + P + PR WTGV+ T PN+ ++D
Sbjct: 81 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 119
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.4 bits (48), Expect = 7.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 689 NDTVRMRGSERYAVRTCSKRIKLVRSPARS 600
N T+R R S R+CS++ + R+ R+
Sbjct: 273 NSTIRSRSSSLSRSRSCSRQAETPRADDRA 302
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.4 bits (48), Expect = 7.2
Identities = 8/34 (23%), Positives = 21/34 (61%)
Frame = -1
Query: 615 VSRAIVLNPRRTGRDALLREKCTSSRDVKRFTYR 514
++R + L+P + G ++ KC + ++++R +R
Sbjct: 1685 MARVVDLHPGKDGVTRVVTLKCANGKEIRRPIHR 1718
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 23.4 bits (48), Expect = 7.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 209 ATEGRGERDAP*SRVVESAALSGW*TPSKAKYDRETDSEQVP 334
+TE ER +RV SAAL + K +R +SEQ+P
Sbjct: 868 STESMEERKR--TRVALSAALEQARQEASEKGERPDESEQIP 907
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 16 EEKKLTRISLVAASEQ 63
EE+K TR++L AA EQ
Sbjct: 873 EERKRTRVALSAALEQ 888
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 260 SQQPDSKERPSRRDPPSLRAWHP 192
SQ+ S++R RRDPP R P
Sbjct: 219 SQRNRSQQRSPRRDPPINRQHTP 241
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 7.2
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +3
Query: 462 VRSDVDG-TFVSCVRSPR 512
V +D+ G TF+SC SPR
Sbjct: 76 VAADIGGITFISCYASPR 93
>AM182454-1|CAJ65692.1| 182|Anopheles gambiae globin 2 protein.
Length = 182
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 176 GRFPVEGARPVATEGRGERDAP 241
GRFP P+A EG + + P
Sbjct: 146 GRFPATPKTPIADEGGDDANDP 167
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,258
Number of Sequences: 2352
Number of extensions: 14354
Number of successful extensions: 34
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -