Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0222
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029926-1|ABM92800.1|  563|Drosophila melanogaster IP06983p pro...    31   2.1  
AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p pro...    31   2.1  
AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding ...    31   2.1  
AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-P...    31   2.1  
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr...    30   3.7  
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA...    30   3.7  
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro...    29   6.4  

>BT029926-1|ABM92800.1|  563|Drosophila melanogaster IP06983p
           protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 451 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 347
           A  +T+NL +  FEF    PE FH    SLF+ LF
Sbjct: 378 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 409


>AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p
           protein.
          Length = 1075

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 451 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 347
           A  +T+NL +  FEF    PE FH    SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615


>AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding
           protein 11 protein.
          Length = 1075

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 451 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 347
           A  +T+NL +  FEF    PE FH    SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615


>AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-PA
           protein.
          Length = 1075

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 451 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 347
           A  +T+NL +  FEF    PE FH    SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615


>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
           protein.
          Length = 1795

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 267 AALSTTRL*GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTT 112
           + +STT       SP+P+ +TG  P+T  +P +R T T    T    +  TT
Sbjct: 684 STVSTTTKKSTESSPKPTSSTG-KPTTTPKPSTRTTPTTTKVTTTTQITTTT 734


>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
           protein.
          Length = 1795

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 267 AALSTTRL*GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTT 112
           + +STT       SP+P+ +TG  P+T  +P +R T T    T    +  TT
Sbjct: 684 STVSTTTKKSTESSPKPTSSTG-KPTTTPKPSTRTTPTTTKVTTTTQITTTT 734


>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
           protein.
          Length = 1062

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 594 NPRRTGRDALLREKCTSSRDVKRFTYRAEENERTKRTFRQHLNARKRTPERKR 436
           N R+  ++    ++   S+D +R   R    ER     RQ L  R+R+ ERKR
Sbjct: 536 NERQRSKERQRSKERERSKDRQRSRERRRSKERQLSKDRQGLKERQRSNERKR 588


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,808,440
Number of Sequences: 53049
Number of extensions: 623306
Number of successful extensions: 1823
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1813
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)