Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0217
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 637 GRWPWKSESAKECATTHLPKQPAL 708
           GR  WK    +  AT  L K P+L
Sbjct: 79  GRKAWKHLDFRNSATAELLKNPSL 102


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 637 GRWPWKSESAKECATTHLPKQPAL 708
           GR  WK    +  AT  L K P+L
Sbjct: 79  GRKAWKHLDFRNSATAELLKNPSL 102


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 724 KRHPFSGLVASAG 686
           KRHPF+ L  SAG
Sbjct: 435 KRHPFAYLPFSAG 447


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 724 KRHPFSGLVASAG 686
           KRHPF+ L  SAG
Sbjct: 435 KRHPFAYLPFSAG 447


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,822
Number of Sequences: 336
Number of extensions: 3805
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)