Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0215
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z74041-8|CAA98519.2|  610|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    30   2.1  
DQ482732-1|ABF20555.1|  610|Caenorhabditis elegans SNF-11 protein.     30   2.1  
AY529124-1|AAT02634.1|  610|Caenorhabditis elegans GABA transpor...    30   2.1  
AF034078-1|AAC02976.1|  815|Caenorhabditis elegans putative E1-E...    30   2.1  
Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and bel...    29   3.7  
AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and bel...    29   3.7  
AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and bel...    29   3.7  
Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p4...    28   8.7  
AC025716-22|AAK39613.1|  630|Caenorhabditis elegans Zwilch (dros...    28   8.7  

>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
           protein Y49E10.11b protein.
          Length = 1089

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 227 QDEG*SYCSIHLFYYAKDFETF-YKTACFARVHLNQGQF 340
           Q+E   YC+ HL    +D+ +F Y+T CF+  HL + ++
Sbjct: 549 QEEAVEYCTEHL----EDYASFGYRTLCFSMRHLTEQEY 583


>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
           protein Y49E10.11a protein.
          Length = 1139

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 227 QDEG*SYCSIHLFYYAKDFETF-YKTACFARVHLNQGQF 340
           Q+E   YC+ HL    +D+ +F Y+T CF+  HL + ++
Sbjct: 549 QEEAVEYCTEHL----EDYASFGYRTLCFSMRHLTEQEY 583


>Z74041-8|CAA98519.2|  610|Caenorhabditis elegans Hypothetical
           protein T03F7.1 protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 487 NEAILHLCYVNFLQHFHIHKHFRVYFIRSRNNETVAIRALDNSDVEGIQE 338
           N  I     V  L H HIH++ + +F+  + N TV   A D S V  ++E
Sbjct: 152 NRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVC-SAADLSVVSPVKE 200


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = -2

Query: 583  LHYCIKRR*NNWLCKRSSRFPCECHLSCGFRINEAILHLCYVNFLQHFHIHKHFRVYFIR 404
            +H+C  R  N+  C   S  P  CH  C  +  ++ ++   +N LQ        +  F+ 
Sbjct: 3009 IHFCAARGTNHTECCSKSLVPIHCHSFCD-QSQDSDVNSLSINHLQCVQYFNDIKSCFLE 3067

Query: 403  SRNNE 389
              N E
Sbjct: 3068 HANQE 3072


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = -2

Query: 583  LHYCIKRR*NNWLCKRSSRFPCECHLSCGFRINEAILHLCYVNFLQHFHIHKHFRVYFIR 404
            +H+C  R  N+  C   S  P  CH  C  +  ++ ++   +N LQ        +  F+ 
Sbjct: 3009 IHFCAARGTNHTECCSKSLVPIHCHSFCD-QSQDSDVNSLSINHLQCVQYFNDIKSCFLE 3067

Query: 403  SRNNE 389
              N E
Sbjct: 3068 HANQE 3072


>DQ482732-1|ABF20555.1|  610|Caenorhabditis elegans SNF-11 protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 487 NEAILHLCYVNFLQHFHIHKHFRVYFIRSRNNETVAIRALDNSDVEGIQE 338
           N  I     V  L H HIH++ + +F+  + N TV   A D S V  ++E
Sbjct: 152 NRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVC-SAADLSVVSPVKE 200


>AY529124-1|AAT02634.1|  610|Caenorhabditis elegans GABA transporter
           protein protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 487 NEAILHLCYVNFLQHFHIHKHFRVYFIRSRNNETVAIRALDNSDVEGIQE 338
           N  I     V  L H HIH++ + +F+  + N TV   A D S V  ++E
Sbjct: 152 NRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVC-SAADLSVVSPVKE 200


>AF034078-1|AAC02976.1|  815|Caenorhabditis elegans putative E1-E2
           ATPase protein.
          Length = 815

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 227 QDEG*SYCSIHLFYYAKDFETF-YKTACFARVHLNQGQF 340
           Q+E   YC+ HL    +D+ +F Y+T CF+  HL + ++
Sbjct: 225 QEEAVEYCTEHL----EDYASFGYRTLCFSMRHLTEQEY 259


>Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical
           protein F53H4.1 protein.
          Length = 957

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +3

Query: 147 KKAVEEFLKMYRTGFMPKNLEFSVFYDKMRDEAIALSIYSITLRTLKRSTRLPVLRVCIS 326
           KKA ++ +K    GF  K L  S+F D   D+ +A+  +SI+L+      R+  +++  S
Sbjct: 723 KKAAKKRMKNKLAGFEDKKLLLSLFDD---DKLVAMREHSISLQNSSSMNRIEKMKMRKS 779

Query: 327 I 329
           I
Sbjct: 780 I 780


>AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform c protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 514 IHKENDYFVYKANYSNAVLYNNEE 585
           IHKE   F YK+N   A+LY   E
Sbjct: 238 IHKEATKFSYKSNIQTAILYGGRE 261


>AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform b protein.
          Length = 644

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 514 IHKENDYFVYKANYSNAVLYNNEE 585
           IHKE   F YK+N   A+LY   E
Sbjct: 222 IHKEATKFSYKSNIQTAILYGGRE 245


>AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform a protein.
          Length = 641

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 514 IHKENDYFVYKANYSNAVLYNNEE 585
           IHKE   F YK+N   A+LY   E
Sbjct: 219 IHKEATKFSYKSNIQTAILYGGRE 242


>Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical
           protein C47B2.1 protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/68 (20%), Positives = 31/68 (45%)
 Frame = +2

Query: 242 SYCSIHLFYYAKDFETFYKTACFARVHLNQGQFLYAFYIAVIQRSDCHGFVVPAPYEVYP 421
           SYCS+  +++  DF  F+ T C     + +   +    + +I R + +G    + +  Y 
Sbjct: 24  SYCSLLFYFFTVDFPYFFLTKCSLNFRITKFFCVVFGSLNIILRCNDYGSHFLSTWCAYR 83

Query: 422 KMFMNMEV 445
            ++   +V
Sbjct: 84  ALYFTRKV 91


>AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p450
           family protein 34A6 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 48  SFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEF 167
           +F   +S ++TDDE +K  K+++ E  M+N   +K +  F
Sbjct: 397 AFATQLSAMHTDDETFKNHKEFNPERFMENNNLEKKLIPF 436


>AC025716-22|AAK39613.1|  630|Caenorhabditis elegans Zwilch
           (drosophila) homolog protein1 protein.
          Length = 630

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -2

Query: 550 WLCKRSSRFPCECHLSCGFRINEAILHLCYVNFLQHFHIHKHFRV 416
           W+   SS+FP  C L+ G R N  +        L HF+     RV
Sbjct: 174 WISTTSSKFPSICWLAAG-RTNRNVQFAAATRVLGHFNNENSERV 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,974,896
Number of Sequences: 27780
Number of extensions: 348476
Number of successful extensions: 945
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)