Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0210
(512 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IDT6 Cluster: ABC transporter, putative; n=1; Plasmod... 36 0.54
UniRef50_Q0N3X7 Cluster: Chch142-like protein; n=1; Clanis bilin... 34 2.2
UniRef50_Q05FU1 Cluster: 3-phosphoshikimate 1-carboxyvinyltransf... 34 2.2
UniRef50_Q7RR39 Cluster: Protein with 5'-3' exonuclease domain; ... 33 5.0
UniRef50_A0DGI6 Cluster: Chromosome undetermined scaffold_5, who... 33 5.0
UniRef50_Q5CVD1 Cluster: Large protein with possible domain of n... 32 6.7
UniRef50_Q09FQ2 Cluster: Putative membrane protein ycf1; n=2; Ma... 32 6.7
UniRef50_Q1Q5Y4 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
UniRef50_Q7RMF5 Cluster: Dihydropteroate synthase, putative; n=1... 32 8.8
UniRef50_Q7R2D4 Cluster: GLP_623_77611_85776; n=1; Giardia lambl... 32 8.8
>UniRef50_Q8IDT6 Cluster: ABC transporter, putative; n=1; Plasmodium
falciparum 3D7|Rep: ABC transporter, putative -
Plasmodium falciparum (isolate 3D7)
Length = 925
Score = 35.9 bits (79), Expect = 0.54
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 417 CVYMLLVYKELSYKFVYMCIINNSDQIGINTYWAINAKCFYDNCNK-NELH 268
C++ +Y+ L Y V + I NN++ N Y+ +KC + N N N +H
Sbjct: 665 CIFNRTIYENLIYGLVPLYIKNNNNNNNNNYYYQYLSKCIFQNMNPGNNIH 715
>UniRef50_Q0N3X7 Cluster: Chch142-like protein; n=1; Clanis
bilineata nucleopolyhedrosis virus|Rep: Chch142-like
protein - Clanis bilineata nucleopolyhedrosis virus
Length = 209
Score = 33.9 bits (74), Expect = 2.2
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = -3
Query: 369 YMCIINNSDQIGINTYWAINAKCFYDNCNKNELHINNTLFLLPFNIKV*NYSFIKLKLEE 190
++ +N D IN + +A Y NCN N + L+ + F + +E
Sbjct: 3 WVVTVNCGDAAFINAHRRFHAALSYSNCNSNIMSTLRNKSLIKSMQQQTEPEFHTVSVEN 62
Query: 189 LRVKLSNDFTLIKAND*RFNKLLK 118
L+ K++ L+K ++ R NK+LK
Sbjct: 63 LK-KITRAVLLLKQSNLRLNKMLK 85
>UniRef50_Q05FU1 Cluster: 3-phosphoshikimate
1-carboxyvinyltransferase; n=1; Candidatus Carsonella
ruddii PV|Rep: 3-phosphoshikimate
1-carboxyvinyltransferase - Carsonella ruddii (strain
PV)
Length = 407
Score = 33.9 bits (74), Expect = 2.2
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = -3
Query: 438 NFKIIILCVYMLLVYKELSYKFVYMCIINNSDQIGI-NTYWAINAKCFYDNCNKNELHIN 262
NF + + LV +++ F+Y IINN + I + + K Y N N ++L I+
Sbjct: 235 NFNKFRIGFFDFLVINNINFFFIYKKIINNEHIVKILFLNFKLRIKTIYSN-NISKL-ID 292
Query: 261 N----TLFLLPFNIKV*NYSFIKLKLEELRVKLSNDFTLIKAN 145
+FLL FN K+ Y LEEL+ K SN F I N
Sbjct: 293 EIPCLLIFLLNFNAKIKIYG-----LEELKFKESNRFLNIYKN 330
>UniRef50_Q7RR39 Cluster: Protein with 5'-3' exonuclease domain; n=4;
cellular organisms|Rep: Protein with 5'-3' exonuclease
domain - Plasmodium yoelii yoelii
Length = 1092
Score = 32.7 bits (71), Expect = 5.0
Identities = 33/121 (27%), Positives = 53/121 (43%)
Frame = -3
Query: 480 VKYCQSLHVTKVRNNFKIIILCVYMLLVYKELSYKFVYMCIINNSDQIGINTYWAINAKC 301
+KY +++ K++ +KII + V K + + NN + N N K
Sbjct: 949 IKYYWNVYAKKLKKFYKIIYYKSKKIYVSKVSLFSIEFERRFNNPTNLLYNNKRFPNMKQ 1008
Query: 300 FYDNCNKNELHINNTLFLLPFNIKV*NYSFIKLKLEELRVKLSNDFTLIKAND*RFNKLL 121
DN NK+ ++N L F+IK NY + L++L K + FT + D NK
Sbjct: 1009 KNDNNNKSVEELDN----LYFDIKN-NYIYSHNHLKKLNKKNNRLFTKTQNIDTNTNKFS 1063
Query: 120 K 118
K
Sbjct: 1064 K 1064
>UniRef50_A0DGI6 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_5,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1618
Score = 32.7 bits (71), Expect = 5.0
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -3
Query: 498 PQFNFSVKYCQSLHVTKVRNNFKIIILCVYMLLVYKELSYKFVYMCIINNSDQIGINTY 322
P F+ +S+ + +NF +++LC+ +LLV KE++ C I NS +N Y
Sbjct: 47 PSLLFTTNVLKSILIIPYSSNFSLMLLCL-ILLVLKEVT--LAIFCTIENSTYKIVNKY 102
>UniRef50_Q5CVD1 Cluster: Large protein with possible domain of
nucleoporin, Non-repetitive/WGA- negative nucleoporin;
n=3; Cryptosporidium|Rep: Large protein with possible
domain of nucleoporin, Non-repetitive/WGA- negative
nucleoporin - Cryptosporidium parvum Iowa II
Length = 2222
Score = 32.3 bits (70), Expect = 6.7
Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = -3
Query: 507 KVSPQFNFSVKYCQSLHVTKVRNNFKIIILCVYMLLVYKELSYKFVYMCII-NNSDQIGI 331
++S N + QS + + +N+ I + ++ + F+Y ++ ++ D+I +
Sbjct: 413 ELSKLINANYNKKQSSVIQQKKNSNFISYINIHSIHPTNPQESDFIYAILVTDHGDRIYL 472
Query: 330 NTYWAI-NAKCFYDNCNKNELHINNTLFLLPFNIKV*NYSFIKLKLEELRVKLSN 169
+ + N CF N N ++N + +P N++V + + E+ KL N
Sbjct: 473 ESVFECGNKPCFVSNSQFNNQFLHNLNYSIPINMRVKEFKKTSIISEDSEEKLIN 527
>UniRef50_Q09FQ2 Cluster: Putative membrane protein ycf1; n=2;
Magnoliophyta|Rep: Putative membrane protein ycf1 -
Nandina domestica (Heavenly bamboo)
Length = 1843
Score = 32.3 bits (70), Expect = 6.7
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -3
Query: 444 RNNFKIIILCVYMLLVYKELSYKFVYMCIINNSDQIGINTYWAINAKCFYDNCNKNE 274
R + ++I C Y L + E Y + CII NS +I + + K FY N + +E
Sbjct: 1066 RRSNRLIRKCYYFLKFFIERIYTDILFCII-NSLRIKVKLFLEAKNKLFYKNSSNDE 1121
>UniRef50_Q1Q5Y4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 488
Score = 31.9 bits (69), Expect = 8.8
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -3
Query: 420 LCVYMLLVYKELSYKFV-YMCIINNSDQIGINTYWAINAKCFYDNCNKNELHINNTLFLL 244
+ + ML ++K+ + + ++ +D G++ YW + + FYDN KN T +L
Sbjct: 418 MAILMLYLFKKFDTEINGFANGLDKTDLYGLDNYWLLLYQLFYDNKIKNPYKDEETFKIL 477
Query: 243 PFNIKV*NYSFIKLK 199
N N +FI+ K
Sbjct: 478 KDN----NVNFIQSK 488
>UniRef50_Q7RMF5 Cluster: Dihydropteroate synthase, putative; n=1;
Plasmodium yoelii yoelii|Rep: Dihydropteroate synthase,
putative - Plasmodium yoelii yoelii
Length = 688
Score = 31.9 bits (69), Expect = 8.8
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -3
Query: 294 DNCNKNELHIN---NTLFLLPFNIKV*NYSFIKLKLEELRVKLSNDFTLIKAND*RFNKL 124
D NKN+L + +T++ P +I NY K +E+ V + ND + ND + KL
Sbjct: 426 DKLNKNDLSLQKKTSTIYKPPISIDTMNYDLFKECVEKNLVDILNDISAC-TNDPKIIKL 484
Query: 123 LK 118
LK
Sbjct: 485 LK 486
>UniRef50_Q7R2D4 Cluster: GLP_623_77611_85776; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_77611_85776 - Giardia lamblia
ATCC 50803
Length = 2721
Score = 31.9 bits (69), Expect = 8.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 378 KFVYMCIINNSDQIGINTYWAINAKCFYDNCNKNELHINNTLFLLPF 238
KF+ + + S + ++TYW+ A Y+N N LH + TL L F
Sbjct: 508 KFIRLFLWGVSSKRTMDTYWSDIAYLLYNNMNYKRLHTSRTLKELNF 554
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,884,839
Number of Sequences: 1657284
Number of extensions: 8564113
Number of successful extensions: 17213
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17203
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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