Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0210
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.40 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.40 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   0.69 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   0.69 
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   4.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.5  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.5  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 422 YYVCTCYWFTKSYHTNLFTC 363
           Y +   +W+T +  TN+F C
Sbjct: 260 YIIVVIFWYTVNASTNIFLC 279


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 422 YYVCTCYWFTKSYHTNLFTC 363
           Y +   +W+T +  TN+F C
Sbjct: 260 YIIVVIFWYTVNASTNIFLC 279


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 110 HLRSPNGMKKFSVRYTEHICMILQSLNGH 24
           HLR+  G K F     ++ C+    LN H
Sbjct: 249 HLRNHAGSKPFQCNKCDYTCVNKSMLNSH 277


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 110 HLRSPNGMKKFSVRYTEHICMILQSLNGH 24
           HLR+  G K F     ++ C+    LN H
Sbjct: 7   HLRNHAGSKPFQCNKCDYTCVNKSMLNSH 35


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 60  FSVAYTKFFHSIR*SQMNIILITY 131
           F + Y K FH +  S  N I   Y
Sbjct: 41  FVIGYVKHFHPLALSNKNAIDFNY 64


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 98  VIANEHYFNNLLNLQSFALIN 160
           V+  EH+F+   ++QS +L+N
Sbjct: 342 VLNMEHFFSVKCSIQSESLLN 362


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 498 PQFNFSVKYCQS 463
           PQFNF+ +Y Q+
Sbjct: 209 PQFNFNYQYNQA 220


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 498 PQFNFSVKYCQS 463
           PQFNF+ +Y Q+
Sbjct: 229 PQFNFNYQYNQA 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,870
Number of Sequences: 336
Number of extensions: 2848
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)